Detailed information NTG0931618

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACB335_RS08800
• Genome accession: NZ_CP167022
• Coordinates: 1776738..1777844 (+)
• Length: 368 a.a.
• NCBI ID: WP_011185108.1
• Uniprot ID: Q5X9A5
• Organism: Streptococcus pyogenes strain Isolate 4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1771738..1782844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB335_RS08775 (ACB335_08775)	pgsA	1771847..1772389 (-)	543	WP_002991432.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ACB335_RS08780 (ACB335_08780)	-	1772403..1773428 (-)	1026	WP_011285332.1	RodZ family helix-turn-helix domain-containing protein	-
ACB335_RS08785 (ACB335_08785)	yfmH	1773478..1774767 (-)	1290	WP_002991436.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
ACB335_RS08790 (ACB335_08790)	yfmF	1774769..1776013 (-)	1245	WP_030127514.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
ACB335_RS08795 (ACB335_08795)	yaaA	1776323..1776736 (+)	414	WP_011889257.1	S4 domain-containing protein YaaA	-
ACB335_RS08800 (ACB335_08800)	recF	1776738..1777844 (+)	1107	WP_011185108.1	DNA replication/repair protein RecF	Machinery gene
ACB335_RS08805 (ACB335_08805)	-	1777900..1778763 (-)	864	WP_002992310.1	GRP family sugar transporter	-
ACB335_RS08810 (ACB335_08810)	guaB	1778965..1780446 (-)	1482	WP_002991454.1	IMP dehydrogenase	-
ACB335_RS08815 (ACB335_08815)	trpS	1780754..1781776 (-)	1023	WP_002991455.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41795.71 Da
• Isoelectric Point: 7.8294

>NTDB_id=931618 ACB335_RS08800 WP_011185108.1 1776738..1777844(+) (recF) [Streptococcus pyogenes strain Isolate 4]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLAGYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQIDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=931618 ACB335_RS08800 WP_011185108.1 1776738..1777844(+) (recF) [Streptococcus pyogenes strain Isolate 4]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTGAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTGGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGCGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTCCACGTGACAAAAGGAACCGTTCAAATTGATTCTGATATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

3D structure

• AlphaFold DB: Q5X9A5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.842	99.457	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.722	100	0.465