Detailed information NTG0931507

Bioinformatically predicted

Overview

• Name: comQ
• Type: Regulator
• Locus tag: U6C02_RS09770
• Genome accession: NZ_CP143843
• Coordinates: 1889374..1890306 (+)
• Length: 310 a.a.
• NCBI ID: WP_050560672.1
• Uniprot ID: A0A6A8LDH0
• Organism: Bacillus velezensis strain YM-3
• Function: modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1884374..1895306

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U6C02_RS09745 (U6C02_09745)	-	1884850..1885401 (+)	552	WP_003152033.1	cysteine hydrolase family protein	-
U6C02_RS09750 (U6C02_09750)	-	1885419..1886885 (+)	1467	WP_014305722.1	nicotinate phosphoribosyltransferase	-
U6C02_RS09755 (U6C02_09755)	-	1887015..1888235 (+)	1221	WP_003152038.1	EAL and HDOD domain-containing protein	-
U6C02_RS09760 (U6C02_09760)	-	1888242..1888583 (-)	342	WP_003152040.1	hypothetical protein	-
U6C02_RS09765 (U6C02_09765)	degQ	1889049..1889189 (+)	141	WP_003152043.1	degradation enzyme regulation protein DegQ	Regulator
U6C02_RS09770 (U6C02_09770)	comQ	1889374..1890306 (+)	933	WP_050560672.1	class 1 isoprenoid biosynthesis enzyme	Regulator
U6C02_RS09780 (U6C02_09780)	comP	1890459..1892762 (+)	2304	WP_003152050.1	histidine kinase	Regulator
U6C02_RS09785 (U6C02_09785)	comA	1892843..1893487 (+)	645	WP_003152052.1	response regulator transcription factor	Regulator
U6C02_RS09790 (U6C02_09790)	-	1893509..1893892 (+)	384	WP_003152054.1	hotdog fold thioesterase	-
U6C02_RS09795 (U6C02_09795)	mnhG	1893932..1894306 (-)	375	WP_003152056.1	monovalent cation/H(+) antiporter subunit G	-
U6C02_RS09800 (U6C02_09800)	-	1894290..1894574 (-)	285	WP_003152057.1	Na(+)/H(+) antiporter subunit F1	-
U6C02_RS09805 (U6C02_09805)	-	1894574..1895050 (-)	477	WP_003152059.1	Na+/H+ antiporter subunit E	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35636.78 Da
• Isoelectric Point: 5.4532

>NTDB_id=931507 U6C02_RS09770 WP_050560672.1 1889374..1890306(+) (comQ) [Bacillus velezensis strain YM-3]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGESQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide

• Length: 933 bp

>NTDB_id=931507 U6C02_RS09770 WP_050560672.1 1889374..1890306(+) (comQ) [Bacillus velezensis strain YM-3]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAGTCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGACGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains

Predicted by InterproScan.

• Polyprenyl synthetase (polyprenyl_synt) (44-227)

3D structure

• AlphaFold DB: A0A6A8LDH0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Bacillus subtilis subsp. subtilis str. 168	60.9	93.226	0.568