Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ACB363_RS02080 Genome accession   NZ_CP167021
Coordinates   408863..409897 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain Isolate 5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 403863..414897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB363_RS02050 (ACB363_02050) tsaE 404928..405389 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACB363_RS02055 (ACB363_02055) - 405364..405888 (+) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  ACB363_RS02060 (ACB363_02060) - 405897..407180 (+) 1284 WP_002983372.1 LCP family protein -
  ACB363_RS02065 (ACB363_02065) - 407291..407647 (-) 357 WP_002983373.1 hypothetical protein -
  ACB363_RS02070 (ACB363_02070) - 407644..408063 (-) 420 WP_002983376.1 HIT family protein -
  ACB363_RS02075 (ACB363_02075) pptA 408135..408860 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB363_RS02080 (ACB363_02080) pptB 408863..409897 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  ACB363_RS02085 (ACB363_02085) ccrZ 409961..410752 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB363_RS02090 (ACB363_02090) trmB 410752..411387 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB363_RS02100 (ACB363_02100) rimP 411646..412182 (+) 537 WP_011528897.1 ribosome maturation factor RimP -
  ACB363_RS02105 (ACB363_02105) nusA 412357..413514 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  ACB363_RS02110 (ACB363_02110) rnpM 413530..413826 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  ACB363_RS02115 (ACB363_02115) - 413819..414121 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=931465 ACB363_RS02080 WP_010922583.1 408863..409897(+) (pptB) [Streptococcus pyogenes strain Isolate 5]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=931465 ACB363_RS02080 WP_010922583.1 408863..409897(+) (pptB) [Streptococcus pyogenes strain Isolate 5]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427