Detailed information NTG0930864

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACB359_RS08315
• Genome accession: NZ_CP167013
• Coordinates: 1706116..1707222 (+)
• Length: 368 a.a.
• NCBI ID: WP_011185108.1
• Uniprot ID: Q5X9A5
• Organism: Streptococcus pyogenes strain Isolate 16
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1701116..1712222

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB359_RS08290 (ACB359_08290)	pgsA	1701225..1701767 (-)	543	WP_002991432.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ACB359_RS08295 (ACB359_08295)	-	1701781..1702806 (-)	1026	WP_011285332.1	RodZ family helix-turn-helix domain-containing protein	-
ACB359_RS08300 (ACB359_08300)	yfmH	1702856..1704145 (-)	1290	WP_002991436.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
ACB359_RS08305 (ACB359_08305)	yfmF	1704147..1705391 (-)	1245	WP_030127514.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
ACB359_RS08310 (ACB359_08310)	yaaA	1705701..1706114 (+)	414	WP_011889257.1	S4 domain-containing protein YaaA	-
ACB359_RS08315 (ACB359_08315)	recF	1706116..1707222 (+)	1107	WP_011185108.1	DNA replication/repair protein RecF	Machinery gene
ACB359_RS08320 (ACB359_08320)	-	1707278..1708141 (-)	864	WP_002992310.1	GRP family sugar transporter	-
ACB359_RS08325 (ACB359_08325)	guaB	1708343..1709824 (-)	1482	WP_002991454.1	IMP dehydrogenase	-
ACB359_RS08330 (ACB359_08330)	trpS	1710132..1711154 (-)	1023	WP_002991455.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41795.71 Da
• Isoelectric Point: 7.8294

>NTDB_id=930864 ACB359_RS08315 WP_011185108.1 1706116..1707222(+) (recF) [Streptococcus pyogenes strain Isolate 16]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLAGYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQIDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=930864 ACB359_RS08315 WP_011185108.1 1706116..1707222(+) (recF) [Streptococcus pyogenes strain Isolate 16]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTGAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTGGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGCGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTCCACGTGACAAAAGGAACCGTTCAAATTGATTCTGATATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

3D structure

• AlphaFold DB: Q5X9A5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.842	99.457	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.722	100	0.465