Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ACB359_RS06475 Genome accession   NZ_CP167013
Coordinates   1310359..1311393 (-) Length   344 a.a.
NCBI ID   WP_031577431.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 16     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1305359..1316393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB359_RS06440 (ACB359_06440) - 1306135..1306437 (-) 303 WP_011285079.1 YlxQ-related RNA-binding protein -
  ACB359_RS06445 (ACB359_06445) rnpM 1306430..1306726 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ACB359_RS06450 (ACB359_06450) nusA 1306742..1307899 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  ACB359_RS06455 (ACB359_06455) rimP 1308074..1308610 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ACB359_RS06465 (ACB359_06465) trmB 1308869..1309504 (-) 636 WP_031488472.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB359_RS06470 (ACB359_06470) ccrZ 1309504..1310295 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB359_RS06475 (ACB359_06475) pptB 1310359..1311393 (-) 1035 WP_031577431.1 ABC transporter permease Regulator
  ACB359_RS06480 (ACB359_06480) pptA 1311396..1312121 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB359_RS06485 (ACB359_06485) - 1312193..1312612 (+) 420 WP_002983376.1 HIT family protein -
  ACB359_RS06490 (ACB359_06490) - 1312609..1312965 (+) 357 WP_031488470.1 hypothetical protein -
  ACB359_RS06495 (ACB359_06495) - 1313076..1314359 (-) 1284 WP_031488469.1 LCP family protein -
  ACB359_RS06500 (ACB359_06500) - 1314368..1314892 (-) 525 WP_031488468.1 GNAT family N-acetyltransferase -
  ACB359_RS06505 (ACB359_06505) tsaE 1314867..1315328 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40256.54 Da        Isoelectric Point: 10.3713

>NTDB_id=930843 ACB359_RS06475 WP_031577431.1 1310359..1311393(-) (pptB) [Streptococcus pyogenes strain Isolate 16]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISIKVKERAYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=930843 ACB359_RS06475 WP_031577431.1 1310359..1311393(-) (pptB) [Streptococcus pyogenes strain Isolate 16]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTATAAAAGTGAAAGAAAGAGCTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCCAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

43.023

100

0.43
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43