Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | MWM16_RS08925 | Genome accession | NZ_AP025617 |
| Coordinates | 1639959..1640963 (+) | Length | 334 a.a. |
| NCBI ID | WP_244344450.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain SNM7-6 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1634959..1645963
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM16_RS08895 (TthSNM76_17470) | - | 1635109..1636329 (+) | 1221 | WP_244344447.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| MWM16_RS08900 (TthSNM76_17480) | - | 1636339..1636887 (+) | 549 | WP_244344448.1 | Uma2 family endonuclease | - |
| MWM16_RS08905 (TthSNM76_17490) | - | 1636865..1637839 (-) | 975 | WP_244344449.1 | bifunctional oligoribonuclease/PAP phosphatase NrnA | - |
| MWM16_RS08915 (TthSNM76_17500) | - | 1638037..1638924 (-) | 888 | WP_011174227.1 | acyltransferase | - |
| MWM16_RS08920 (TthSNM76_17510) | era | 1638969..1639874 (-) | 906 | WP_008630929.1 | GTPase Era | - |
| MWM16_RS08925 (TthSNM76_17520) | dprA | 1639959..1640963 (+) | 1005 | WP_244344450.1 | DNA-processing protein DprA | Machinery gene |
| MWM16_RS08930 (TthSNM76_17530) | - | 1640967..1641875 (-) | 909 | WP_244341216.1 | manganese catalase family protein | - |
| MWM16_RS08935 (TthSNM76_17540) | - | 1641985..1642938 (+) | 954 | WP_011227726.1 | hydrogen peroxide-inducible genes activator | - |
| MWM16_RS08940 (TthSNM76_17550) | - | 1642925..1643881 (+) | 957 | WP_244344451.1 | branched-chain amino acid transaminase | - |
| MWM16_RS08945 (TthSNM76_17560) | - | 1643871..1644059 (+) | 189 | WP_038034982.1 | hypothetical protein | - |
| MWM16_RS08950 (TthSNM76_17570) | - | 1644061..1644300 (+) | 240 | WP_008630920.1 | hypothetical protein | - |
| MWM16_RS08955 (TthSNM76_17580) | trmH | 1644290..1644874 (-) | 585 | WP_244341211.1 | tRNA (guanosine(18)-2'-O)-methyltransferase TrmH | - |
| MWM16_RS08960 (TthSNM76_17590) | hisG | 1644871..1645491 (-) | 621 | WP_244341209.1 | ATP phosphoribosyltransferase | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 36124.97 Da Isoelectric Point: 6.8991
>NTDB_id=93071 MWM16_RS08925 WP_244344450.1 1639959..1640963(+) (dprA) [Thermus thermophilus strain SNM7-6]
MDPLALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERRRAEALGVRLLGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARKLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLSRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDER
SLGANRLIQDGAYPVLSAEDVLAYLGVAARPKPLPGLSPEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG
MDPLALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERRRAEALGVRLLGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARKLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLSRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDER
SLGANRLIQDGAYPVLSAEDVLAYLGVAARPKPLPGLSPEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG
Nucleotide
Download Length: 1005 bp
>NTDB_id=93071 MWM16_RS08925 WP_244344450.1 1639959..1640963(+) (dprA) [Thermus thermophilus strain SNM7-6]
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTCTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAGAGGCGGC
GCGCCGAGGCCCTAGGGGTGCGCCTCCTGGGTCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCCCGGAAGCTCGCCCGGGAGCTTTCCGAGGCCGGGCTCTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCCTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGGACCGGCCCTAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTCTCCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCTTGGAGCTCGGCAAGGAGGTGCTGGCCGTCCCCGGAAGGCCCACGGACGAGCGT
TCCCTGGGGGCGAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGACGTCCTTGCCTACCTGGGGGT
GGCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTCCTCACCCTTTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTCTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAGAGGCGGC
GCGCCGAGGCCCTAGGGGTGCGCCTCCTGGGTCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCCCGGAAGCTCGCCCGGGAGCTTTCCGAGGCCGGGCTCTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCCTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGGACCGGCCCTAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTCTCCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCTTGGAGCTCGGCAAGGAGGTGCTGGCCGTCCCCGGAAGGCCCACGGACGAGCGT
TCCCTGGGGGCGAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGACGTCCTTGCCTACCTGGGGGT
GGCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTCCTCACCCTTTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Thermus thermophilus HB27 |
98.503 |
100 |
0.985 |
| dprA | Vibrio campbellii strain DS40M4 |
38.268 |
100 |
0.41 |
| dprA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.734 |
87.725 |
0.401 |
| dprA | Vibrio cholerae strain A1552 |
37.535 |
100 |
0.401 |