Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ACB355_RS07535 Genome accession   NZ_CP167011
Coordinates   1480276..1481310 (-) Length   344 a.a.
NCBI ID   WP_023078705.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 18     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1475276..1486310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB355_RS07500 (ACB355_07500) - 1476052..1476354 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ACB355_RS07505 (ACB355_07505) rnpM 1476347..1476643 (-) 297 WP_136302936.1 RNase P modulator RnpM -
  ACB355_RS07510 (ACB355_07510) nusA 1476659..1477816 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ACB355_RS07515 (ACB355_07515) rimP 1477991..1478527 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ACB355_RS07525 (ACB355_07525) trmB 1478786..1479421 (-) 636 WP_023078685.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB355_RS07530 (ACB355_07530) ccrZ 1479421..1480212 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB355_RS07535 (ACB355_07535) pptB 1480276..1481310 (-) 1035 WP_023078705.1 ABC transporter permease Regulator
  ACB355_RS07540 (ACB355_07540) pptA 1481313..1482038 (-) 726 WP_023078675.1 ABC transporter ATP-binding protein Regulator
  ACB355_RS07545 (ACB355_07545) - 1482110..1482529 (+) 420 WP_002983376.1 HIT family protein -
  ACB355_RS07550 (ACB355_07550) - 1482526..1482882 (+) 357 WP_009880754.1 hypothetical protein -
  ACB355_RS07555 (ACB355_07555) - 1482993..1484267 (-) 1275 WP_020837594.1 LCP family protein -
  ACB355_RS07560 (ACB355_07560) - 1484276..1484800 (-) 525 WP_023078656.1 GNAT family N-acetyltransferase -
  ACB355_RS07565 (ACB355_07565) tsaE 1484775..1485236 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40265.51 Da        Isoelectric Point: 10.3713

>NTDB_id=930659 ACB355_RS07535 WP_023078705.1 1480276..1481310(-) (pptB) [Streptococcus pyogenes strain Isolate 18]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNQFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=930659 ACB355_RS07535 WP_023078705.1 1480276..1481310(-) (pptB) [Streptococcus pyogenes strain Isolate 18]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCAGTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

42.733

100

0.427
  pptB Streptococcus salivarius strain HSISS4

42.442

100

0.424