Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | MWM13_RS10685 | Genome accession | NZ_AP025609 |
| Coordinates | 1965415..1965723 (+) | Length | 102 a.a. |
| NCBI ID | WP_024119555.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain SNM3-3 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1960415..1970723
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM13_RS10655 (TthSNM33_21030) | - | 1961497..1961961 (+) | 465 | WP_011229049.1 | hypothetical protein | - |
| MWM13_RS10660 (TthSNM33_21040) | pfkA | 1961938..1962906 (-) | 969 | WP_011173968.1 | 6-phosphofructokinase | - |
| MWM13_RS10665 (TthSNM33_21050) | rsmI | 1962903..1963697 (-) | 795 | WP_244347696.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MWM13_RS10670 (TthSNM33_21060) | - | 1963699..1964193 (-) | 495 | WP_244347697.1 | TFIIB-type zinc ribbon-containing protein | - |
| MWM13_RS10675 (TthSNM33_21070) | - | 1964256..1964783 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| MWM13_RS10680 (TthSNM33_21080) | - | 1964816..1965442 (+) | 627 | WP_011173972.1 | YcxB family protein | - |
| MWM13_RS10685 (TthSNM33_21090) | comEA | 1965415..1965723 (+) | 309 | WP_024119555.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| MWM13_RS10690 (TthSNM33_21100) | comA/comEC | 1965720..1967753 (+) | 2034 | WP_244347698.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| MWM13_RS10695 (TthSNM33_21110) | - | 1967741..1968550 (-) | 810 | WP_024119553.1 | ParB/RepB/Spo0J family partition protein | - |
| MWM13_RS10700 (TthSNM33_21120) | soj | 1968534..1969283 (-) | 750 | WP_011173976.1 | chromosome-partitioning ATPase Soj | - |
| MWM13_RS10705 (TthSNM33_21130) | rsmG | 1969277..1970026 (-) | 750 | WP_203971383.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10947.23 Da Isoelectric Point: 10.3435
>NTDB_id=93025 MWM13_RS10685 WP_024119555.1 1965415..1965723(+) (comEA) [Thermus thermophilus strain SNM3-3]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=93025 MWM13_RS10685 WP_024119555.1 1965415..1965723(+) (comEA) [Thermus thermophilus strain SNM3-3]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
100 |
100 |
1 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |