Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | U4D55_RS05415 | Genome accession | NZ_CP143641 |
| Coordinates | 1103206..1103604 (+) | Length | 132 a.a. |
| NCBI ID | WP_011275249.1 | Uniprot ID | A0A5B2YX53 |
| Organism | Staphylococcus haemolyticus strain M62.3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1098206..1108604
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U4D55_RS05385 (U4D55_05385) | atpD | 1098353..1099765 (+) | 1413 | WP_011275243.1 | F0F1 ATP synthase subunit beta | - |
| U4D55_RS05390 (U4D55_05390) | - | 1099786..1100187 (+) | 402 | WP_011275244.1 | F0F1 ATP synthase subunit epsilon | - |
| U4D55_RS05395 (U4D55_05395) | - | 1100315..1100548 (+) | 234 | WP_011275245.1 | DUF1146 family protein | - |
| U4D55_RS05400 (U4D55_05400) | murA | 1100653..1101918 (+) | 1266 | WP_033079610.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| U4D55_RS05405 (U4D55_05405) | fabZ | 1101958..1102395 (+) | 438 | WP_011275247.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| U4D55_RS05410 (U4D55_05410) | - | 1102575..1103018 (-) | 444 | WP_011275248.1 | YwpF-like family protein | - |
| U4D55_RS05415 (U4D55_05415) | ssb | 1103206..1103604 (+) | 399 | WP_011275249.1 | single-stranded DNA-binding protein | Machinery gene |
| U4D55_RS05420 (U4D55_05420) | - | 1103943..1104650 (+) | 708 | WP_011275250.1 | transglycosylase family protein | - |
| U4D55_RS05425 (U4D55_05425) | tenA | 1104939..1105628 (+) | 690 | WP_037571335.1 | thiaminase II | - |
| U4D55_RS05430 (U4D55_05430) | thiD | 1105621..1106442 (+) | 822 | WP_037538797.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| U4D55_RS05435 (U4D55_05435) | thiM | 1106435..1107226 (+) | 792 | WP_011275253.1 | hydroxyethylthiazole kinase | - |
| U4D55_RS05440 (U4D55_05440) | thiE | 1107228..1107866 (+) | 639 | WP_011275254.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15141.05 Da Isoelectric Point: 4.7942
>NTDB_id=930202 U4D55_RS05415 WP_011275249.1 1103206..1103604(+) (ssb) [Staphylococcus haemolyticus strain M62.3]
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
Nucleotide
Download Length: 399 bp
>NTDB_id=930202 U4D55_RS05415 WP_011275249.1 1103206..1103604(+) (ssb) [Staphylococcus haemolyticus strain M62.3]
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
99.242 |
0.75 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
99.242 |
0.742 |