Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   U4D55_RS02830 Genome accession   NZ_CP143641
Coordinates   584027..584923 (+) Length   298 a.a.
NCBI ID   WP_053019566.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain M62.3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 579027..589923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U4D55_RS02805 (U4D55_02805) - 579908..580843 (+) 936 WP_110708891.1 LCP family protein -
  U4D55_RS02810 (U4D55_02810) - 580933..582408 (-) 1476 WP_016930640.1 alkaline phosphatase -
  U4D55_RS02815 (U4D55_02815) - 582806..582976 (+) 171 WP_011274728.1 hypothetical protein -
  U4D55_RS02820 (U4D55_02820) - 583162..583326 (+) 165 WP_016930641.1 hypothetical protein -
  U4D55_RS02825 (U4D55_02825) braR 583356..584024 (+) 669 WP_016930642.1 response regulator transcription factor Regulator
  U4D55_RS02830 (U4D55_02830) braS 584027..584923 (+) 897 WP_053019566.1 sensor histidine kinase Regulator
  U4D55_RS02835 (U4D55_02835) - 585105..585854 (+) 750 WP_053019565.1 ABC transporter ATP-binding protein -
  U4D55_RS02840 (U4D55_02840) - 585856..587847 (+) 1992 WP_011274733.1 ABC transporter permease -
  U4D55_RS02845 (U4D55_02845) - 587936..589126 (+) 1191 WP_033079697.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34579.15 Da        Isoelectric Point: 6.6576

>NTDB_id=930198 U4D55_RS02830 WP_053019566.1 584027..584923(+) (braS) [Staphylococcus haemolyticus strain M62.3]
MLKAFIKSILNEIIIVITCILLFLLIFFLFNLPLSAFLLGAGIMLFIMIIYWLVQLSGFKEQVQMADTIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VRPLIMKYSIQFIDQKTKIHYERCEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKHISQHLHHHVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=930198 U4D55_RS02830 WP_053019566.1 584027..584923(+) (braS) [Staphylococcus haemolyticus strain M62.3]
ATGCTGAAAGCTTTTATTAAATCGATATTAAATGAAATCATTATAGTTATTACATGTATATTATTATTCTTACTTATCTT
CTTTCTATTTAATCTGCCATTGAGTGCGTTTCTATTAGGCGCCGGAATTATGCTATTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGATTTAAAGAACAAGTACAGATGGCAGATACTATTCATGAACTAGAGCATGAATTGCAACAGGTAAAA
AGTGATCAGACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACATGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTGTTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAAGAAACGGATATGTCCTTTTCAAAAGTAAAGATTAATGACCTT
GTCCGTCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTGTGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCGATCATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCGCGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTGACTATTCGTGATAATGGTGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAACATATCTCTCAACATTTACATCATCATGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

63.014

97.987

0.617