Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   U4D55_RS02825 Genome accession   NZ_CP143641
Coordinates   583356..584024 (+) Length   222 a.a.
NCBI ID   WP_016930642.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain M62.3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 578356..589024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U4D55_RS02800 (U4D55_02800) - 578754..579887 (+) 1134 WP_306460868.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  U4D55_RS02805 (U4D55_02805) - 579908..580843 (+) 936 WP_110708891.1 LCP family protein -
  U4D55_RS02810 (U4D55_02810) - 580933..582408 (-) 1476 WP_016930640.1 alkaline phosphatase -
  U4D55_RS02815 (U4D55_02815) - 582806..582976 (+) 171 WP_011274728.1 hypothetical protein -
  U4D55_RS02820 (U4D55_02820) - 583162..583326 (+) 165 WP_016930641.1 hypothetical protein -
  U4D55_RS02825 (U4D55_02825) braR 583356..584024 (+) 669 WP_016930642.1 response regulator transcription factor Regulator
  U4D55_RS02830 (U4D55_02830) braS 584027..584923 (+) 897 WP_053019566.1 sensor histidine kinase Regulator
  U4D55_RS02835 (U4D55_02835) - 585105..585854 (+) 750 WP_053019565.1 ABC transporter ATP-binding protein -
  U4D55_RS02840 (U4D55_02840) - 585856..587847 (+) 1992 WP_011274733.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25695.51 Da        Isoelectric Point: 4.6536

>NTDB_id=930197 U4D55_RS02825 WP_016930642.1 583356..584024(+) (braR) [Staphylococcus haemolyticus strain M62.3]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEVTVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=930197 U4D55_RS02825 WP_016930642.1 583356..584024(+) (braR) [Staphylococcus haemolyticus strain M62.3]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCACAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAGTTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCTTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77