Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ACB354_RS02470 Genome accession   NZ_CP167004
Coordinates   453183..454217 (+) Length   344 a.a.
NCBI ID   WP_002983381.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 28     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 448183..459217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB354_RS02440 (ACB354_02440) tsaE 449248..449709 (+) 462 WP_011184866.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACB354_RS02445 (ACB354_02445) - 449684..450208 (+) 525 WP_011184865.1 GNAT family N-acetyltransferase -
  ACB354_RS02450 (ACB354_02450) - 450217..451500 (+) 1284 WP_011184864.1 LCP family protein -
  ACB354_RS02455 (ACB354_02455) - 451611..451967 (-) 357 WP_002988657.1 hypothetical protein -
  ACB354_RS02460 (ACB354_02460) - 451964..452383 (-) 420 WP_002983376.1 HIT family protein -
  ACB354_RS02465 (ACB354_02465) pptA 452455..453180 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB354_RS02470 (ACB354_02470) pptB 453183..454217 (+) 1035 WP_002983381.1 ABC transporter permease Regulator
  ACB354_RS02475 (ACB354_02475) ccrZ 454281..455072 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB354_RS02480 (ACB354_02480) trmB 455072..455707 (+) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB354_RS02490 (ACB354_02490) rimP 455971..456507 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  ACB354_RS02495 (ACB354_02495) nusA 456682..457839 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  ACB354_RS02500 (ACB354_02500) rnpM 457855..458151 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  ACB354_RS02505 (ACB354_02505) - 458144..458446 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40208.44 Da        Isoelectric Point: 10.3713

>NTDB_id=929957 ACB354_RS02470 WP_002983381.1 453183..454217(+) (pptB) [Streptococcus pyogenes strain Isolate 28]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLLIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=929957 ACB354_RS02470 WP_002983381.1 453183..454217(+) (pptB) [Streptococcus pyogenes strain Isolate 28]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTACTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427