Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ACB348_RS02655 Genome accession   NZ_CP167002
Coordinates   479227..480261 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain Isolate 30     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 474227..485261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB348_RS02625 (ACB348_02625) tsaE 475301..475762 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACB348_RS02630 (ACB348_02630) - 475737..476261 (+) 525 WP_111704937.1 GNAT family N-acetyltransferase -
  ACB348_RS02635 (ACB348_02635) - 476270..477544 (+) 1275 WP_020837594.1 LCP family protein -
  ACB348_RS02640 (ACB348_02640) - 477655..478011 (-) 357 WP_009880754.1 hypothetical protein -
  ACB348_RS02645 (ACB348_02645) - 478008..478427 (-) 420 WP_002983376.1 HIT family protein -
  ACB348_RS02650 (ACB348_02650) pptA 478499..479224 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ACB348_RS02655 (ACB348_02655) pptB 479227..480261 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  ACB348_RS02660 (ACB348_02660) ccrZ 480325..481116 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ACB348_RS02665 (ACB348_02665) trmB 481116..481751 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACB348_RS02675 (ACB348_02675) rimP 482010..482546 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  ACB348_RS02680 (ACB348_02680) nusA 482721..483878 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  ACB348_RS02685 (ACB348_02685) rnpM 483894..484190 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  ACB348_RS02690 (ACB348_02690) - 484183..484485 (+) 303 WP_111693350.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=929761 ACB348_RS02655 WP_010922583.1 479227..480261(+) (pptB) [Streptococcus pyogenes strain Isolate 30]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=929761 ACB348_RS02655 WP_010922583.1 479227..480261(+) (pptB) [Streptococcus pyogenes strain Isolate 30]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427