Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   V1502_RS05895 Genome accession   NZ_CP143546
Coordinates   1200517..1201185 (+) Length   222 a.a.
NCBI ID   WP_409253439.1    Uniprot ID   -
Organism   Bacillus sp. SCS-153A     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1195517..1206185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1502_RS05875 (V1502_05875) - 1195692..1196627 (+) 936 WP_409253437.1 ABC transporter ATP-binding protein -
  V1502_RS05880 (V1502_05880) - 1196869..1198050 (+) 1182 WP_409254292.1 putative glycoside hydrolase -
  V1502_RS05885 (V1502_05885) - 1198373..1198945 (+) 573 WP_409253438.1 GNAT family N-acetyltransferase -
  V1502_RS05890 (V1502_05890) spxA 1199360..1199755 (+) 396 WP_006837718.1 transcriptional regulator SpxA -
  V1502_RS05895 (V1502_05895) mecA 1200517..1201185 (+) 669 WP_409253439.1 adaptor protein MecA Regulator
  V1502_RS05900 (V1502_05900) - 1201287..1202399 (+) 1113 WP_409253440.1 competence protein CoiA -
  V1502_RS05905 (V1502_05905) pepF 1202518..1204335 (+) 1818 WP_409253441.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 222 a.a.        Molecular weight: 26401.32 Da        Isoelectric Point: 4.0763

>NTDB_id=929552 V1502_RS05895 WP_409253439.1 1200517..1201185(+) (mecA) [Bacillus sp. SCS-153A]
MEIERINDNTVKFYISYGDIEERGFDREEIWYNRERSEELFWEMMDEVHQEENFTIEGPLWIQVQALDKGLEVLVTRAQV
TKDGQKFELPIPEDKIKDLPVDERIEDFLDQHFQMKQDSAENEGALEFTIKFKDFEDVISLSKKMSASTYEHLSTKLFSY
EGTYYIHLEFSDEYFTEEEIDNVLSIMLEYGNESSLTVHRLIEYGTSIMEEDVFNTVTKHFS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=929552 V1502_RS05895 WP_409253439.1 1200517..1201185(+) (mecA) [Bacillus sp. SCS-153A]
ATGGAGATAGAACGCATTAATGATAATACTGTAAAGTTTTATATTTCATATGGCGATATAGAGGAAAGAGGGTTCGACCG
GGAAGAAATTTGGTATAACCGGGAGAGAAGTGAAGAACTTTTCTGGGAAATGATGGATGAAGTTCACCAGGAAGAGAATT
TTACGATTGAAGGTCCATTGTGGATCCAAGTACAAGCTCTTGATAAAGGTCTGGAAGTTCTTGTGACAAGGGCACAAGTT
ACTAAGGACGGGCAGAAATTCGAACTGCCTATTCCAGAAGATAAAATCAAAGACTTGCCTGTTGATGAACGAATAGAAGA
TTTTCTCGATCAGCATTTTCAAATGAAACAGGATTCAGCAGAGAATGAAGGGGCTTTGGAATTCACAATAAAGTTCAAGG
ATTTTGAAGATGTCATTTCACTATCCAAGAAAATGTCCGCTTCGACCTATGAACATCTTTCAACGAAGTTGTTCTCCTAT
GAAGGAACTTATTATATTCATCTCGAGTTTTCAGATGAATACTTTACAGAGGAAGAAATCGACAATGTATTGAGCATCAT
GCTTGAGTACGGAAATGAATCAAGTTTGACTGTGCATCGATTGATTGAGTACGGTACTTCCATAATGGAAGAAGATGTCT
TCAATACGGTAACCAAACATTTCAGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

59.556

100

0.604