Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   V1502_RS05815 Genome accession   NZ_CP143546
Coordinates   1181984..1182172 (+) Length   62 a.a.
NCBI ID   WP_409254290.1    Uniprot ID   -
Organism   Bacillus sp. SCS-153A     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1176984..1187172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1502_RS05795 (V1502_05795) - 1178722..1178904 (-) 183 WP_409253423.1 YjzD family protein -
  V1502_RS05800 (V1502_05800) - 1179293..1180033 (+) 741 WP_409253424.1 hydrolase -
  V1502_RS05805 (V1502_05805) - 1180060..1180821 (+) 762 WP_409253425.1 NAD-dependent epimerase/dehydratase family protein -
  V1502_RS05810 (V1502_05810) med 1181019..1181978 (+) 960 WP_409253426.1 BMP family ABC transporter substrate-binding protein Regulator
  V1502_RS05815 (V1502_05815) comZ 1181984..1182172 (+) 189 WP_409254290.1 ComZ family protein Regulator
  V1502_RS05820 (V1502_05820) - 1182588..1182818 (-) 231 WP_409253427.1 hypothetical protein -
  V1502_RS05825 (V1502_05825) - 1183503..1184438 (+) 936 WP_409253428.1 beta-ketoacyl-ACP synthase III -
  V1502_RS05830 (V1502_05830) fabF 1184504..1185742 (+) 1239 WP_409253429.1 beta-ketoacyl-ACP synthase II -
  V1502_RS05835 (V1502_05835) - 1185834..1186616 (+) 783 WP_409253430.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7335.47 Da        Isoelectric Point: 4.1605

>NTDB_id=929549 V1502_RS05815 WP_409254290.1 1181984..1182172(+) (comZ) [Bacillus sp. SCS-153A]
MQDKNMEFMQIAMKYLPEAKQQLEQSGVELSMEMIQPFMNLFTQVMNEAYELGRKDALKDNE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=929549 V1502_RS05815 WP_409254290.1 1181984..1182172(+) (comZ) [Bacillus sp. SCS-153A]
ATGCAAGATAAAAATATGGAGTTTATGCAAATTGCGATGAAGTATCTGCCTGAGGCAAAACAACAGCTGGAGCAATCTGG
AGTTGAACTGTCCATGGAAATGATCCAGCCGTTTATGAACCTGTTTACCCAGGTGATGAATGAAGCCTACGAACTGGGAC
GTAAAGATGCACTGAAAGATAATGAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

98.387

0.71