Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | MWM06_RS01410 | Genome accession | NZ_AP025596 |
| Coordinates | 249193..250197 (-) | Length | 334 a.a. |
| NCBI ID | WP_244361048.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain SNM1-1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 244193..255197
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM06_RS01375 (TthSNM11_02680) | hisG | 244665..245285 (+) | 621 | WP_244347762.1 | ATP phosphoribosyltransferase | - |
| MWM06_RS01380 (TthSNM11_02690) | trmH | 245282..245866 (+) | 585 | WP_143584516.1 | tRNA (guanosine(18)-2'-O)-methyltransferase TrmH | - |
| MWM06_RS01385 (TthSNM11_02700) | - | 245856..246095 (-) | 240 | WP_008630920.1 | hypothetical protein | - |
| MWM06_RS01390 (TthSNM11_02710) | - | 246097..246285 (-) | 189 | WP_038034982.1 | hypothetical protein | - |
| MWM06_RS01395 (TthSNM11_02720) | - | 246275..247231 (-) | 957 | WP_244361041.1 | branched-chain amino acid transaminase | - |
| MWM06_RS01400 (TthSNM11_02730) | - | 247218..248171 (-) | 954 | WP_244361043.1 | hydrogen peroxide-inducible genes activator | - |
| MWM06_RS01405 (TthSNM11_02740) | - | 248281..249189 (+) | 909 | WP_244361046.1 | manganese catalase family protein | - |
| MWM06_RS01410 (TthSNM11_02750) | dprA | 249193..250197 (-) | 1005 | WP_244361048.1 | DNA-processing protein DprA | Machinery gene |
| MWM06_RS01415 (TthSNM11_02760) | era | 250282..251187 (+) | 906 | WP_008630929.1 | GTPase Era | - |
| MWM06_RS01420 (TthSNM11_02770) | - | 251232..252119 (+) | 888 | WP_011174227.1 | acyltransferase | - |
| MWM06_RS01430 (TthSNM11_02780) | - | 252317..253291 (+) | 975 | WP_014630223.1 | bifunctional oligoribonuclease/PAP phosphatase NrnA | - |
| MWM06_RS01435 (TthSNM11_02790) | - | 253269..253817 (-) | 549 | WP_014509831.1 | Uma2 family endonuclease | - |
| MWM06_RS01440 (TthSNM11_02800) | - | 253827..255047 (-) | 1221 | WP_244361051.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 36261.12 Da Isoelectric Point: 6.8892
>NTDB_id=92951 MWM06_RS01410 WP_244361048.1 249193..250197(-) (dprA) [Thermus thermophilus strain SNM1-1]
MDPLALALLPGIGPRRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERRRAEALGVRLLGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARRLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPMDER
SLGANRLIQDGAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPETLAAALGIPPERVLSLLTLLELK
GLARALPGGRYGPG
MDPLALALLPGIGPRRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERRRAEALGVRLLGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARRLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPMDER
SLGANRLIQDGAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPETLAAALGIPPERVLSLLTLLELK
GLARALPGGRYGPG
Nucleotide
Download Length: 1005 bp
>NTDB_id=92951 MWM06_RS01410 WP_244361048.1 249193..250197(-) (dprA) [Thermus thermophilus strain SNM1-1]
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAGGCGGCTTCTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAGAGGCGGC
GCGCCGAGGCCCTAGGGGTGCGCCTCCTGGGCCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCCAGGAGGCTCGCCCGGGAGCTTTCCGAGGCCGGGCTCTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCTTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGCACCGGGCCCAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTTTGCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCCTGGAGCTCGGCAAGGAGGTGCTGGCCGTGCCCGGAAGGCCCATGGACGAGCGT
TCCCTGGGGGCGAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGATGTCCTCTCCTATCTGGGAAT
GTCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGACCCTGGCCGCGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTCCTCACCCTTTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAGGCGGCTTCTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAGAGGCGGC
GCGCCGAGGCCCTAGGGGTGCGCCTCCTGGGCCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCCAGGAGGCTCGCCCGGGAGCTTTCCGAGGCCGGGCTCTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCTTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGCACCGGGCCCAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTTTGCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCCTGGAGCTCGGCAAGGAGGTGCTGGCCGTGCCCGGAAGGCCCATGGACGAGCGT
TCCCTGGGGGCGAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGATGTCCTCTCCTATCTGGGAAT
GTCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGACCCTGGCCGCGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTCCTCACCCTTTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Thermus thermophilus HB27 |
98.802 |
100 |
0.988 |
| dprA | Vibrio campbellii strain DS40M4 |
38.547 |
100 |
0.413 |
| dprA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.734 |
87.725 |
0.401 |
| dprA | Vibrio cholerae strain A1552 |
36.975 |
100 |
0.395 |