Detailed information NTG0092929

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MWM05_RS02955
• Genome accession: NZ_AP025593
• Coordinates: 538318..539319 (+)
• Length: 333 a.a.
• NCBI ID: WP_244363343.1
• Uniprot ID: -
• Organism: Thermus brockianus strain SNM4-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 533318..544319

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWM05_RS02935 (TbrSNM41_05710)	-	534424..535554 (+)	1131	WP_071676602.1	citrate synthase/methylcitrate synthase	-
MWM05_RS02940 (TbrSNM41_05720)	-	535595..536404 (-)	810	WP_071676601.1	HesA/MoeB/ThiF family protein	-
MWM05_RS02945 (TbrSNM41_05730)	-	536405..537286 (-)	882	WP_071676600.1	acyltransferase	-
MWM05_RS02950 (TbrSNM41_05740)	era	537331..538236 (-)	906	WP_071676599.1	GTPase Era	-
MWM05_RS02955 (TbrSNM41_05750)	dprA	538318..539319 (+)	1002	WP_244363343.1	DNA-processing protein DprA	Machinery gene
MWM05_RS02960 (TbrSNM41_05760)	-	539329..540237 (-)	909	WP_244363345.1	manganese catalase family protein	-
MWM05_RS02965 (TbrSNM41_05770)	-	540347..541299 (+)	953	Protein_575	LysR substrate-binding domain-containing protein	-
MWM05_RS02970 (TbrSNM41_05790)	-	541286..542239 (+)	954	WP_244363347.1	branched-chain amino acid transaminase	-
MWM05_RS02975 (TbrSNM41_05800)	trmH	542229..542804 (-)	576	WP_071676596.1	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	-
MWM05_RS02980 (TbrSNM41_05810)	hisG	542788..543411 (-)	624	WP_071676595.1	ATP phosphoribosyltransferase	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 35734.30 Da
• Isoelectric Point: 6.1749

>NTDB_id=92929 MWM05_RS02955 WP_244363343.1 538318..539319(+) (dprA) [Thermus brockianus strain SNM4-1]
MDPLALAFLPGIGPKRLLEALTQEEPLAFLRERFPEAVSLYPEAERRAEGERRRAESLGIRILGLWEEDFPESLRRLPQP
PTHLYLRGALPPEERAVAIVGTRKASPWALGFARRLARELAEAGLWVVSGLARGIDREAHLGALEGGGRTLGVLGSALDR
VYPPEHRPLAGRMDLVSEFPLGTGPKPEFFPRRNRLIAGLARAVLVVEAPLDSGALITAKHALELGKEVLAVPGRPTDPA
SLGANRLIQDGAYPVLEAGDVLSYLGFSPKPKAPPELSPEEAALYALLSQGEALPEDLAQAAGLPPERVLSLLALLEIKG
LARALPGGRYGPG

Nucleotide

• Length: 1002 bp

>NTDB_id=92929 MWM05_RS02955 WP_244363343.1 538318..539319(+) (dprA) [Thermus brockianus strain SNM4-1]
GTGGACCCCTTGGCCTTGGCCTTCCTCCCCGGGATTGGCCCCAAGCGGCTTCTGGAGGCCCTTACCCAGGAAGAGCCTTT
GGCCTTTCTCCGGGAGCGCTTTCCCGAGGCAGTAAGCCTTTACCCGGAAGCGGAAAGGCGCGCAGAAGGGGAAAGAAGAC
GGGCGGAGAGTTTGGGGATACGCATCCTCGGCCTTTGGGAGGAGGATTTTCCTGAAAGCTTAAGGAGGCTTCCCCAGCCC
CCCACCCACCTGTACCTTCGGGGAGCGCTGCCTCCGGAGGAGCGGGCGGTGGCCATCGTGGGTACCCGCAAGGCCTCCCC
CTGGGCCTTGGGCTTCGCCCGGAGGCTTGCCCGGGAGCTGGCGGAGGCGGGGCTTTGGGTGGTTTCGGGCCTGGCCCGGG
GCATAGACCGGGAGGCCCACCTGGGGGCTTTGGAAGGGGGCGGGCGGACCCTGGGCGTTTTGGGGAGCGCCCTGGACCGG
GTCTATCCGCCCGAACACCGCCCCTTGGCGGGGCGCATGGACCTGGTTTCCGAGTTTCCCTTGGGGACAGGGCCTAAGCC
CGAGTTCTTCCCCAGGCGGAACCGGCTCATCGCTGGGCTTGCCCGGGCGGTGCTGGTGGTGGAGGCTCCCCTGGACTCCG
GGGCCCTCATCACGGCCAAGCACGCCCTGGAACTGGGAAAGGAGGTTCTGGCGGTGCCGGGCCGGCCCACGGACCCCGCC
TCCTTGGGGGCAAACCGCCTCATCCAGGACGGGGCGTACCCCGTCCTCGAGGCCGGGGACGTCCTTTCCTACCTAGGGTT
TTCCCCTAAGCCCAAGGCCCCTCCGGAGCTTTCCCCGGAGGAGGCCGCCCTTTACGCCCTCCTTTCCCAGGGGGAAGCGC
TGCCGGAGGACCTGGCCCAGGCCGCGGGATTGCCCCCGGAAAGGGTGCTTTCCCTTCTCGCCCTCCTGGAGATCAAGGGC
CTGGCCCGGGCCCTTCCCGGAGGGCGCTACGGGCCAGGCTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (269-328)

• DNA recombination-mediator protein A (DNA_processg_A) (56-255)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Thermus thermophilus HB27	82.335	100	0.826
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.936	100	0.465
dprA	Vibrio campbellii strain DS40M4	37.604	100	0.405
dprA	Vibrio cholerae strain A1552	36.74	100	0.399