Detailed information NTG0928519

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: VZE42_RS01810
• Genome accession: NZ_CP143285
• Coordinates: 387076..389226 (+)
• Length: 716 a.a.
• NCBI ID: WP_329794329.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain CGMCC 14177
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 382076..394226

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VZE42_RS01780 (VZE42_01780)	-	383020..383187 (+)	168	WP_153302738.1	hypothetical protein	-
VZE42_RS01785 (VZE42_01785)	-	383205..384545 (+)	1341	WP_027821504.1	GHKL domain-containing protein	-
VZE42_RS01790 (VZE42_01790)	-	384546..385289 (+)	744	WP_015825122.1	response regulator transcription factor	-
VZE42_RS01795 (VZE42_01795)	-	385583..386083 (-)	501	WP_225351141.1	CPBP family intramembrane glutamic endopeptidase	-
VZE42_RS01800 (VZE42_01800)	-	386436..386615 (-)	180	WP_080440456.1	bacteriocin	-
VZE42_RS01805 (VZE42_01805)	plnE	386640..386810 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
VZE42_RS01810 (VZE42_01810)	comA	387076..389226 (+)	2151	WP_329794329.1	peptide cleavage/export ABC transporter	Regulator
VZE42_RS01815 (VZE42_01815)	-	389243..390619 (+)	1377	WP_027821501.1	HlyD family secretion protein	-
VZE42_RS01820 (VZE42_01820)	-	390709..391398 (+)	690	WP_027821500.1	CPBP family intramembrane glutamic endopeptidase	-
VZE42_RS01825 (VZE42_01825)	-	391466..392134 (+)	669	WP_027821499.1	CPBP family intramembrane glutamic endopeptidase	-
VZE42_RS01830 (VZE42_01830)	-	392221..392901 (+)	681	WP_027821498.1	CPBP family intramembrane glutamic endopeptidase	-
VZE42_RS01835 (VZE42_01835)	-	392995..393681 (+)	687	WP_027821497.1	CPBP family intramembrane glutamic endopeptidase	-
VZE42_RS01840 (VZE42_01840)	-	393819..394022 (+)	204	WP_027821496.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79998.75 Da
• Isoelectric Point: 6.6530

>NTDB_id=928519 VZE42_RS01810 WP_329794329.1 387076..389226(+) (comA) [Lactiplantibacillus plantarum strain CGMCC 14177]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVMLNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGVQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=928519 VZE42_RS01810 WP_329794329.1 387076..389226(+) (comA) [Lactiplantibacillus plantarum strain CGMCC 14177]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTCCAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTTGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCTAATAATATGCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAGC
CGAATAGTGGTGATGTCATGCTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACAGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGTTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCTCCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAGAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGCTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.906	99.581	0.587
comA	Streptococcus pneumoniae Rx1	58.626	99.581	0.584
comA	Streptococcus pneumoniae D39	58.626	99.581	0.584
comA	Streptococcus pneumoniae R6	58.626	99.581	0.584
comA	Streptococcus pneumoniae TIGR4	58.485	99.581	0.582
comA	Streptococcus mitis SK321	58.345	99.581	0.581
comA	Streptococcus gordonii str. Challis substr. CH1	57.103	100	0.573
comA/nlmT	Streptococcus mutans UA159	54.596	100	0.547