Detailed information NTG0928443

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: VT264_RS17365
• Genome accession: NZ_CP143266
• Coordinates: 3507142..3508305 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JBCS608
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3502142..3513305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VT264_RS17335 (VT264_17335)	-	3502407..3502826 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
VT264_RS17340 (VT264_17340)	comFC	3502900..3503589 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
VT264_RS17345 (VT264_17345)	-	3503595..3503879 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
VT264_RS17350 (VT264_17350)	comFA	3503937..3505322 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
VT264_RS17355 (VT264_17355)	-	3505430..3506278 (-)	849	WP_024085866.1	DegV family protein	-
VT264_RS17360 (VT264_17360)	degU	3506376..3507065 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
VT264_RS17365 (VT264_17365)	degS	3507142..3508305 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
VT264_RS17370 (VT264_17370)	-	3508528..3509175 (+)	648	WP_003151384.1	YigZ family protein	-
VT264_RS17375 (VT264_17375)	-	3509180..3510394 (+)	1215	WP_014305930.1	LCP family protein	-
VT264_RS17380 (VT264_17380)	-	3510484..3511560 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
VT264_RS17385 (VT264_17385)	tuaH	3511693..3512889 (-)	1197	WP_024085869.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=928443 VT264_RS17365 WP_003151385.1 3507142..3508305(-) (degS) [Bacillus velezensis strain JBCS608]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=928443 VT264_RS17365 WP_003151385.1 3507142..3508305(-) (degS) [Bacillus velezensis strain JBCS608]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948