Detailed information NTG0928290

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB9K51_RS01175
• Genome accession: NZ_CP166757
• Coordinates: 124048..125073 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain CRE287
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 119048..130073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9K51_RS01150 (AB9K51_01150)	rraA	119462..119947 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB9K51_RS01155 (AB9K51_01155)	menA	120040..120966 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB9K51_RS01160 (AB9K51_01160)	hslU	121033..122364 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AB9K51_RS01165 (AB9K51_01165)	hslV	122374..122904 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB9K51_RS01170 (AB9K51_01170)	ftsN	122997..123956 (-)	960	WP_000068847.1	cell division protein FtsN	-
AB9K51_RS01175 (AB9K51_01175)	cytR	124048..125073 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
AB9K51_RS01180 (AB9K51_01180)	priA	125229..127427 (-)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
AB9K51_RS01185 (AB9K51_01185)	rpmE	127630..127842 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AB9K51_RS01190 (AB9K51_01190)	yiiX	127903..128511 (-)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
AB9K51_RS01195 (AB9K51_01195)	metJ	128571..128888 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=928290 AB9K51_RS01175 WP_000644911.1 124048..125073(-) (cytR) [Escherichia coli strain CRE287]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=928290 AB9K51_RS01175 WP_000644911.1 124048..125073(-) (cytR) [Escherichia coli strain CRE287]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625