Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   AB8O64_RS20440 Genome accession   NZ_CP166299
Coordinates   4495990..4497114 (-) Length   374 a.a.
NCBI ID   WP_184739290.1    Uniprot ID   A0A7W7LHE9
Organism   Streptomyces sp. QH1-20     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4490990..4502114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB8O64_RS20415 (AB8O64_20430) - 4491172..4492956 (+) 1785 WP_370420496.1 sensor histidine kinase -
  AB8O64_RS20420 (AB8O64_20435) - 4492953..4493615 (+) 663 WP_370420497.1 response regulator -
  AB8O64_RS20425 (AB8O64_20440) - 4493700..4494179 (+) 480 WP_370420498.1 pyridoxamine 5'-phosphate oxidase family protein -
  AB8O64_RS20430 (AB8O64_20445) - 4494233..4494820 (-) 588 WP_370420499.1 phosphatase PAP2 family protein -
  AB8O64_RS20435 (AB8O64_20450) - 4495036..4495857 (+) 822 WP_370420500.1 hypothetical protein -
  AB8O64_RS20440 (AB8O64_20455) disA 4495990..4497114 (-) 1125 WP_184739290.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AB8O64_RS20445 (AB8O64_20460) radA/sms 4497241..4498656 (-) 1416 WP_184739292.1 DNA repair protein RadA Machinery gene
  AB8O64_RS20450 (AB8O64_20465) - 4498889..4500493 (+) 1605 WP_361934923.1 sigma-70 family RNA polymerase sigma factor -
  AB8O64_RS20455 (AB8O64_20470) - 4500573..4501433 (-) 861 WP_370420502.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40114.94 Da        Isoelectric Point: 5.0060

>NTDB_id=928173 AB8O64_RS20440 WP_184739290.1 4495990..4497114(-) (disA) [Streptomyces sp. QH1-20]
MAANDRASGPGKAGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLLVLGMDKTVESMCTGGFVLDVEFSATRLR
ELCKLDGALIVDKDITKIVRAGVQLVPDASIPTEETGTRHRTAQRVSIQCGYPVISVSQSMRLIALYVGGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLELVRRIATEIAEYVIELGTDGRLLSLQLEELIA
GVEPERDLVVRDYVPEPTAKRTRTVPEALSELDSLSHAELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=928173 AB8O64_RS20440 WP_184739290.1 4495990..4497114(-) (disA) [Streptomyces sp. QH1-20]
GTGGCAGCCAACGACCGGGCATCGGGCCCCGGCAAGGCCGGGGGAAGCTCCGGTGCTGACGGTCTGATGCGCGCTTCGCT
GAGCGCCGTCGCGCCCGGCACGGCTCTTCGGGACGGCCTGGAGCGCATCCTTCGCGGCAATACCGGCGGGCTCCTCGTCC
TGGGCATGGACAAGACCGTCGAATCGATGTGTACGGGCGGATTCGTCCTCGATGTGGAGTTCTCCGCCACCCGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGCGCTGATCGTCGACAAGGACATCACCAAGATCGTGCGGGCGGGCGTGCAGCTCGTCCC
CGATGCCTCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGCAGCGCGTGTCCATCCAGTGCGGTTACCCCG
TCATCTCCGTCAGCCAGTCGATGCGGCTGATCGCGCTGTACGTGGGCGGTGAGCGCCGGGTCCTGGAGGAGTCGGGCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTCCGTCTCGACGAGGTGGCCGGCACGCTCTC
CGCTCTGGAGATCGAGGATCTGGTCACCGTCCGCGATGTCACGGCGGTCTCCCAGCGGCTGGAGCTGGTCCGCCGTATCG
CCACGGAGATCGCGGAGTATGTGATCGAGCTGGGCACCGACGGCCGTCTGCTCTCGCTCCAGCTGGAGGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGACCTGGTCGTGCGGGACTACGTCCCGGAGCCGACCGCCAAGCGCACCCGCACGGTCCCGGA
GGCGCTCTCCGAGCTGGACTCCCTCAGCCACGCCGAGCTGCTCGAACTGCCCATCGTCGCGCGTGCCCTGGGTTACAGCG
GCTCCCCCGAGACGCTGGACTCCGCGGTCTCCCCGCGCGGCTACCGTCTGCTGGCCAAGGTGCCGCGGCTGCCCGGTGCG
ATCATCGACCGGCTCGTCGAGCACTTCGGCGGGCTCCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCCCGCGCCCGCTCGGTCCGCGAGGGGCTGTCCCGGCTCGCCGAGTCCTCGATCCTCGAGCGGTACG
TATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7W7LHE9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438