Detailed information NTG0927399

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: VXJ98_RS00170
• Genome accession: NZ_CP142855
• Coordinates: 38656..39993 (-)
• Length: 445 a.a.
• NCBI ID: WP_329503310.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain Sh8213
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Genomic Context

Location: 33656..44993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VXJ98_RS00145 (VXJ98_00145)	-	34968..35189 (-)	222	WP_064658464.1	hypothetical protein	-
VXJ98_RS00150 (VXJ98_00150)	-	35204..35707 (-)	504	WP_000849084.1	DUF1643 domain-containing protein	-
VXJ98_RS00155 (VXJ98_00155)	-	35723..36037 (-)	315	WP_329503309.1	DUF960 family protein	-
VXJ98_RS00160 (VXJ98_00160)	-	36124..36474 (-)	351	WP_037552474.1	SAUGI family uracil-DNA glycosylase inhibitor	-
VXJ98_RS00165 (VXJ98_00165)	ccrB	36997..38622 (-)	1626	WP_017176077.1	cassette chromosome recombinase CcrB	Machinery gene
VXJ98_RS00170 (VXJ98_00170)	ccrA	38656..39993 (-)	1338	WP_329503310.1	cassette chromosome recombinase CcrA	Machinery gene
VXJ98_RS00175 (VXJ98_00175)	cch1	40181..41950 (-)	1770	WP_413252096.1	cassette chromosome replicative helicase	-
VXJ98_RS00180 (VXJ98_00180)	ssb	41950..42240 (-)	291	WP_053018153.1	cassette chromosome ssDNA-binding protein	-
VXJ98_RS00185 (VXJ98_00185)	-	42411..43481 (+)	1071	WP_053018152.1	hypothetical protein	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 52078.87 Da
• Isoelectric Point: 10.0393

>NTDB_id=927399 VXJ98_RS00170 WP_329503310.1 38656..39993(-) (ccrA) [Staphylococcus hominis strain Sh8213]
MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNIQYITFYSDKQSGRTDKRNGYQQITELIQQGQCDVLCCYRLNRLHRN
LKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIFISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYH
NGTFTIDTVKAPTVKAVFNYYLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI
YEEAQVTRTQKPVKRKPSENQLKQKIKCPYCDSTLTNMTIRKKHHTLRYYVCPQNMNASRFVCEFKGINAQELETSVLAT
CQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLIEKLAQGKIDAETFREQTQSLRQQSKPISSISAYQIRKAFQ
NIIQQRFTLNMLYPYIDEINISKNKSLAGIYFKNEPLNIVKQTMK

Nucleotide

• Length: 1338 bp

>NTDB_id=927399 VXJ98_RS00170 WP_329503310.1 38656..39993(-) (ccrA) [Staphylococcus hominis strain Sh8213]
ATGAAACAAGCAATAGGTTACTTACGACAGAGCACTACAAAGCAACAATCCTTAGCAGCACAAAAACAAACCATCGAGGC
ATTAGCCAAAAAACATAATATTCAATACATTACCTTTTATAGCGATAAGCAATCAGGACGCACTGATAAGCGGAACGGTT
ACCAACAAATTACTGAACTGATTCAACAAGGACAATGTGATGTATTATGTTGTTACAGATTAAACCGACTTCATCGCAAT
CTTAAAAATGCATTAAAACTCATGAAATTGTGTCAAAAATACCATGTCCATATCTTAAGCGTTCATGATGGCTATTTTGA
TATGGATAAAGCATTCGATCGGCTCAAACTCAATATTTTCATCAGCTTGGCCGAACTAGAATCTGATAATATAGGCGAAC
AAGTCAAAAATGGAATCAAAGAAAAAGCGAAACAAGGTAAAATGATTACAACACATGCACCCTTTGGGTATCACTATCAT
AATGGTACTTTCACGATAGACACAGTAAAAGCACCAACAGTAAAAGCTGTGTTCAATTATTACCTTCAAGGTTATGGTTA
TAAAAAAATTGCGCAATACTTAGAAGCTGATGATAAATTCATTAATCGTAAGCCCTATCAAGTGCGTAATATTATCCTTA
ACCCTAATTACTGTGGCCGTGTTATCAATCAATACGGACAATATGAAAACATGTTCCCAGCTATTGTCAGTACAACGATA
TACGAAGAAGCTCAAGTTACCCGAACTCAGAAACCAGTAAAACGTAAGCCGTCAGAAAACCAACTCAAACAAAAAATCAA
ATGTCCTTATTGTGATTCAACACTAACTAATATGACCATTAGAAAAAAGCACCATACATTACGTTATTATGTTTGTCCTC
AAAATATGAATGCATCTCGTTTTGTCTGTGAATTCAAAGGGATCAACGCACAAGAATTAGAAACAAGTGTTTTAGCGACT
TGTCAGGACTTCTTTCAAAATCAACAGCTCTATTCAAAAATAAACCATACTATTCAACAACGACTCAAAAGACAAAGAGA
TATAGAAACTAAAACTACACTCAATCACGAGCAGCTGATAGAAAAATTAGCCCAAGGCAAAATTGATGCAGAAACGTTCA
GAGAACAAACGCAATCATTACGTCAGCAATCAAAACCTATATCATCAATCAGTGCGTATCAAATTCGAAAAGCTTTCCAA
AACATCATTCAACAACGTTTCACACTAAACATGTTGTACCCCTATATTGATGAAATTAATATTTCTAAAAATAAAAGCCT
CGCTGGCATCTATTTCAAAAACGAACCACTGAATATTGTAAAGCAGACTATGAAATGA

Domains

Predicted by InterproScan.

• Recombinase (Recombinase) (170-249)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-322)

• Resolvase, N terminal domain (Resolvase) (4-147)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus COL	99.326	100	0.993
ccrA	Staphylococcus aureus N315	75.281	100	0.753