Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8575_RS03105 | Genome accession | NZ_AP028336 |
| Coordinates | 603037..603420 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10190 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 598037..608420
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8575_RS03085 (B10190_06100) | - | 598116..600050 (-) | 1935 | WP_100620187.1 | RNB domain-containing ribonuclease | - |
| R8575_RS03090 (B10190_06110) | ilvC | 600169..601191 (+) | 1023 | WP_002858483.1 | ketol-acid reductoisomerase | - |
| R8575_RS03095 (B10190_06120) | - | 601195..602277 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| R8575_RS03100 (B10190_06130) | dprA | 602267..603040 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R8575_RS03105 (B10190_06140) | dprB | 603037..603420 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8575_RS03110 (B10190_06150) | - | 603449..604288 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8575_RS03115 (B10190_06160) | msrA | 604464..604961 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8575_RS03120 (B10190_06170) | ppa | 605003..605521 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8575_RS03125 (B10190_06180) | adk | 605531..606109 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8575_RS03130 (B10190_06190) | aspS | 606106..607857 (-) | 1752 | WP_100620190.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=92707 R8575_RS03105 WP_002852281.1 603037..603420(+) (dprB) [Campylobacter jejuni strain BCH-10190]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=92707 R8575_RS03105 WP_002852281.1 603037..603420(+) (dprB) [Campylobacter jejuni strain BCH-10190]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |