Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   AB5L52_RS19465 Genome accession   NZ_CP163525
Coordinates   4278744..4279868 (+) Length   374 a.a.
NCBI ID   WP_351031615.1    Uniprot ID   -
Organism   Streptomyces sp. CG4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4273744..4284868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB5L52_RS19450 (AB5L52_19450) - 4274139..4274996 (+) 858 WP_369365259.1 hypothetical protein -
  AB5L52_RS19455 (AB5L52_19455) - 4275153..4276874 (-) 1722 WP_351031610.1 hypothetical protein -
  AB5L52_RS19460 (AB5L52_19460) radA/sms 4277254..4278663 (+) 1410 WP_351031613.1 DNA repair protein RadA Machinery gene
  AB5L52_RS19465 (AB5L52_19465) disA 4278744..4279868 (+) 1125 WP_351031615.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AB5L52_RS19470 (AB5L52_19470) - 4280003..4280449 (+) 447 WP_351031617.1 RICIN domain-containing protein -
  AB5L52_RS19475 (AB5L52_19475) - 4280505..4281302 (-) 798 WP_351766824.1 hypothetical protein -
  AB5L52_RS19480 (AB5L52_19480) - 4281482..4282357 (+) 876 WP_369365266.1 A/G-specific adenine glycosylase -
  AB5L52_RS19485 (AB5L52_19485) - 4282629..4283168 (+) 540 WP_030751823.1 SigE family RNA polymerase sigma factor -
  AB5L52_RS19490 (AB5L52_19490) - 4283156..4283806 (+) 651 WP_351031623.1 hypothetical protein -
  AB5L52_RS19495 (AB5L52_19495) cseB 4283841..4284545 (+) 705 WP_351031626.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39958.68 Da        Isoelectric Point: 4.9235

>NTDB_id=926602 AB5L52_RS19465 WP_351031615.1 4278744..4279868(+) (disA) [Streptomyces sp. CG4]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSADLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALSELDALSHAELLELGTVARAMGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=926602 AB5L52_RS19465 WP_351031615.1 4278744..4279868(+) (disA) [Streptomyces sp. CG4]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCCGGTACGGCGCTGCGCGACGGCCTGGAGCGCGTCCTGCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGCTCGGACAAGACGGTCGAGGCGATGTGCACGGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCCGCCGACCTGTCGAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
GGACCCGACGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TGGTCTCCGTGTCCCAGTCGATGCGGCTGATCGCCCTCTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCGAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTGCGCCTGGACGAGGTGGCCGGCACCCTCTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGTCCGCCGTCGCCCAGCGACTGGAGATGGTCCGCCGCATCG
CCACCGAAATCGCCGAATATGTGGTTGAACTGGGCACGGACGGGCGTCTTCTCGCGCTTCAGCTGGAGGAGTTGATCGCC
GGGGTCGAGCCCGACCGTGAGCTGGTCGTCCGGGACTACGTCCCCGAGCCGACGGCGAAGCGGTCCCGCACGGTCGAGGA
GGCGCTGTCCGAGCTGGACGCGCTGAGCCACGCGGAGCTGCTGGAGCTCGGCACGGTGGCGCGCGCGATGGGCTACACCG
GGTCTCCCGAGACGCTGGACTCCGCGGTGTCCCCGCGGGGCTTCCGGCTGCTGGCGAAGGTTCCGCGCCTTCCGGGTGCG
ATCATCGACCGGCTGGTGGAGCATTTCGGGGGACTGCAGAAGCTTCTCGCCGCCAGCGTGGACGACCTGCAGACCGTGGA
CGGCGTGGGAGAGGCTCGGGCGCGGAGCGTGCGGGAAGGCCTGTCGCGCTTGGCGGAGTCCTCCATCCTGGAGCGTTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.513

0.43