Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   VDS59_RS06495 Genome accession   NZ_CP142716
Coordinates   1318930..1320207 (-) Length   425 a.a.
NCBI ID   WP_015473823.1    Uniprot ID   M5AET0
Organism   Levilactobacillus brevis strain A156     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1313930..1325207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VDS59_RS06490 (VDS59_06475) - 1317185..1318894 (-) 1710 WP_011668017.1 proline--tRNA ligase -
  VDS59_RS06495 (VDS59_06480) eeP 1318930..1320207 (-) 1278 WP_015473823.1 RIP metalloprotease RseP Regulator
  VDS59_RS06500 (VDS59_06485) - 1320303..1321094 (-) 792 WP_024855605.1 phosphatidate cytidylyltransferase -
  VDS59_RS06505 (VDS59_06490) - 1321116..1321904 (-) 789 WP_011668020.1 isoprenyl transferase -
  VDS59_RS06510 (VDS59_06495) - 1322007..1322429 (-) 423 WP_011668021.1 hypothetical protein -
  VDS59_RS06515 (VDS59_06500) frr 1322456..1323013 (-) 558 WP_015473826.1 ribosome recycling factor -
  VDS59_RS06520 (VDS59_06505) pyrH 1323016..1323738 (-) 723 WP_011668022.1 UMP kinase -
  VDS59_RS06525 (VDS59_06510) tsf 1323885..1324769 (-) 885 WP_011668023.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45969.23 Da        Isoelectric Point: 7.2020

>NTDB_id=926547 VDS59_RS06495 WP_015473823.1 1318930..1320207(-) (eeP) [Levilactobacillus brevis strain A156]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGADEKVERINTSKKSTLFNGIPLEVTATDLEDELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSATKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAVT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=926547 VDS59_RS06495 WP_015473823.1 1318930..1320207(-) (eeP) [Levilactobacillus brevis strain A156]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCGATTGGAATGGGGCCAAAATTGGTTTACCACCGTGGCAAAGATGGCA
CGACTTACACACTGCGGTTATTACCAGTGGGCGGTTACGTCCGGATGGCGGGTGCTGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGCCTGTACGTGGGCGCTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACGGATCTAGAGGATGAGTTGTGGATTGAAGGCTATGAAAATGGTGACGAAA
GTGCCATTAAGCGCTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGACGGGACGGAGCTACAAATTGCCCCGAAG
GACGTTCAATTTCAGTCGGCATCATTAGGCCGACGATTGATGACGAACTTCGCTGGACCGATGAACAATATCTTATTAGC
GATTGTTACCTTTATGCTGATGTCCTTTGCTCAGGGTGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAGGCTGGCGTGAAGACCAACGATAAGATTACGGCAGTCAACGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACCGCGATTCAGCCATTGGCCAACAAAAAAACAACGCTGACGATTCAAAGAGGATCGGCGACCAAACA
CATTACAGTGACACCTAAAGGTGAAACTTCCAACGGTAAAACGGTGGGGATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATCTTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGTTTGAACGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCCACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCGATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAATGTGGAAGCTGCCGTTACG
TTGATTGGCGTGGGGTTCTTAGTTCTGCTTATGTTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(214-261)

(7-410)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB M5AET0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.706

100

0.487

  eeP Streptococcus thermophilus LMD-9

48.706

100

0.487