Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   AB5J89_RS22955 Genome accession   NZ_CP163523
Coordinates   5098737..5099858 (-) Length   373 a.a.
NCBI ID   WP_026247638.1    Uniprot ID   -
Organism   Streptomyces sp. cg2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5093737..5104858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB5J89_RS22935 (AB5J89_22935) - 5094426..5095385 (-) 960 WP_260692403.1 A/G-specific adenine glycosylase -
  AB5J89_RS22940 (AB5J89_22940) - 5095682..5096140 (+) 459 WP_369358001.1 pyridoxamine 5'-phosphate oxidase family protein -
  AB5J89_RS22945 (AB5J89_22945) - 5096401..5097246 (+) 846 WP_369358002.1 hypothetical protein -
  AB5J89_RS22950 (AB5J89_22950) - 5097524..5098507 (+) 984 WP_369358004.1 NAD-dependent epimerase/dehydratase family protein -
  AB5J89_RS22955 (AB5J89_22955) disA 5098737..5099858 (-) 1122 WP_026247638.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AB5J89_RS22960 (AB5J89_22960) radA 5100013..5101425 (-) 1413 WP_221906019.1 DNA repair protein RadA Machinery gene
  AB5J89_RS22965 (AB5J89_22965) - 5101656..5103524 (+) 1869 WP_369358006.1 sigma-70 family RNA polymerase sigma factor -
  AB5J89_RS22970 (AB5J89_22970) - 5103538..5104428 (-) 891 WP_369358008.1 hypothetical protein -

Sequence

Protein


Download         Length: 373 a.a.        Molecular weight: 40186.99 Da        Isoelectric Point: 4.9340

>NTDB_id=926528 AB5J89_RS22955 WP_026247638.1 5098737..5099858(-) (disA) [Streptomyces sp. cg2]
MAANDRASSPGRSAGTGTESLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVESMCTGGFVLDVEFTATRLRE
LCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQTNFPVVSVSQSMRLIALYVDGERRVLEESAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIAG
VEPERELVARDYVPEPTAKRSRTVAEALAELDALSHAELLELPIVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGAV
IDRLVDHFGGLQKLLAASVDDLQAVEGVGETRARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=926528 AB5J89_RS22955 WP_026247638.1 5098737..5099858(-) (disA) [Streptomyces sp. cg2]
GTGGCAGCGAACGACCGGGCGTCGTCTCCCGGCAGGTCCGCAGGGACCGGCACCGAGAGCCTGATGCGCGCCTCGCTGAG
CGCCGTCGCGCCCGGTACGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAATACGGGCGGCCTGATCGTCCTCG
GCTTCGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTCCTCGACGTCGAGTTCACCGCGACCCGGCTGCGCGAG
CTGTGCAAGCTCGACGGGGCGCTGGTGCTGGACAAGGACATCACCAAGATCCTCCGGGCCGGGGTCCAGCTGGTGCCGGA
CGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCCCAGCGGGTCTCCATCCAGACCAACTTCCCGGTGG
TCTCGGTCAGCCAGTCCATGCGCCTGATCGCGCTCTACGTGGACGGCGAGCGCCGCGTCCTGGAGGAGTCCGCGGCGATC
CTCTCCCGCGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTCCGGCTCGACGAGGTCGCCGGCACCCTCTCCGC
CCTGGAGATCGAGGACCTGGTCACCGTCCGCGACGTCTCCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCGCCA
CCGAGATCGCCGAGTACGTCGTCGAACTGGGCACCGACGGCCGGCTGCTGGCCCTCCAGCTGGAGGAGCTGATCGCCGGG
GTGGAGCCGGAGCGCGAACTGGTCGCCCGCGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGCCGAGGC
ACTGGCCGAGCTGGACGCCCTCAGCCACGCCGAACTCCTCGAACTCCCCATCGTGGCCCGCGCGTTGGGCTACAGCGGCT
CTCCCGAGACGCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCCAAGGTCCCCCGCCTCCCCGGCGCGGTC
ATCGACCGCCTGGTCGACCACTTCGGCGGCCTCCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGGCCGTCGAGGG
CGTCGGCGAGACCCGCGCCCGTTCCGTCCGCGAGGGCCTCTCCCGCCTGGCGGAGTCCTCGATCCTGGAACGGTACGTCT
AG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(37-150)

Helix-hairpin-helix motif (HHH)

(331-358)

DisA bacterial checkpoint controller linker region (DisA-linker)

(154-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.098

95.71

0.432