Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   VSY18_RS06125 Genome accession   NZ_CP142670
Coordinates   1178369..1178545 (+) Length   58 a.a.
NCBI ID   WP_048527481.1    Uniprot ID   A0A1J9TAF2
Organism   Bacillus albus strain YK87     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1173369..1183545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VSY18_RS06105 (VSY18_06105) clpC 1173706..1176306 (+) 2601 WP_270738786.1 ATP-dependent chaperone ClpB Regulator
  VSY18_RS06110 (VSY18_06110) - 1176340..1176522 (-) 183 WP_001211116.1 YjzD family protein -
  VSY18_RS06115 (VSY18_06115) - 1176679..1177413 (+) 735 WP_048526692.1 hydrolase -
  VSY18_RS06120 (VSY18_06120) - 1177443..1178315 (+) 873 WP_270738787.1 NAD-dependent epimerase/dehydratase family protein -
  VSY18_RS06125 (VSY18_06125) comZ 1178369..1178545 (+) 177 WP_048527481.1 ComZ family protein Regulator
  VSY18_RS06130 (VSY18_06130) fabH 1178974..1179906 (+) 933 WP_001100534.1 beta-ketoacyl-ACP synthase III -
  VSY18_RS06135 (VSY18_06135) fabF 1179938..1181176 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  VSY18_RS06140 (VSY18_06140) - 1181283..1182071 (+) 789 WP_247998853.1 DUF2268 domain-containing protein -
  VSY18_RS06145 (VSY18_06145) - 1182214..1182960 (+) 747 WP_048526694.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6590.76 Da        Isoelectric Point: 4.4963

>NTDB_id=926317 VSY18_RS06125 WP_048527481.1 1178369..1178545(+) (comZ) [Bacillus albus strain YK87]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKAEKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=926317 VSY18_RS06125 WP_048527481.1 1178369..1178545(+) (comZ) [Bacillus albus strain YK87]
ATGAATGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTGGATGATAATGG
AATTGCGCTTGATATGGAAAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCGGAAAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9TAF2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

94.828

0.569