Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | VP459_RS13470 | Genome accession | NZ_CP142600 |
| Coordinates | 2750102..2750401 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain M19060305 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2745102..2755401
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VP459_RS13430 (VP459_13435) | - | 2745163..2745366 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| VP459_RS13435 (VP459_13440) | - | 2745363..2746349 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| VP459_RS13440 (VP459_13445) | - | 2746349..2746678 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| VP459_RS13445 (VP459_13450) | - | 2746675..2747298 (+) | 624 | WP_001223006.1 | MBL fold metallo-hydrolase | - |
| VP459_RS13450 (VP459_13455) | comGA | 2747350..2748324 (+) | 975 | WP_000697215.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| VP459_RS13455 (VP459_13460) | comGB | 2748296..2749366 (+) | 1071 | WP_000776403.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| VP459_RS13460 (VP459_13465) | comGC | 2749380..2749691 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| VP459_RS13465 (VP459_13470) | comGD | 2749669..2750115 (+) | 447 | WP_075583651.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| VP459_RS13470 (VP459_13475) | comGE | 2750102..2750401 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| VP459_RS13475 (VP459_13480) | comGF | 2750319..2750816 (+) | 498 | WP_029697681.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| VP459_RS13480 (VP459_13485) | - | 2750913..2751059 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| VP459_RS13485 (VP459_13490) | - | 2751049..2751573 (+) | 525 | WP_001015122.1 | shikimate kinase | - |
| VP459_RS13490 (VP459_13495) | gcvT | 2751732..2752823 (+) | 1092 | WP_000093355.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| VP459_RS13495 (VP459_13500) | gcvPA | 2752843..2754189 (+) | 1347 | WP_000019688.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=926166 VP459_RS13470 WP_000844413.1 2750102..2750401(+) (comGE) [Staphylococcus aureus strain M19060305]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=926166 VP459_RS13470 WP_000844413.1 2750102..2750401(+) (comGE) [Staphylococcus aureus strain M19060305]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |