Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   VP459_RS02790 Genome accession   NZ_CP142600
Coordinates   595959..596945 (-) Length   328 a.a.
NCBI ID   WP_000959294.1    Uniprot ID   A0AAE2ZVZ2
Organism   Staphylococcus aureus strain M19060305     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 590959..601945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VP459_RS02765 (VP459_02760) - 591219..591566 (-) 348 WP_001242102.1 hypothetical protein -
  VP459_RS02770 (VP459_02765) - 591752..592345 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  VP459_RS02775 (VP459_02770) - 592449..592814 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  VP459_RS02780 (VP459_02775) yjbH 592837..593643 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  VP459_RS02785 (VP459_02780) pepF 594103..595911 (-) 1809 WP_375240143.1 oligoendopeptidase F -
  VP459_RS02790 (VP459_02785) coiA 595959..596945 (-) 987 WP_000959294.1 competence protein CoiA Machinery gene
  VP459_RS02795 (VP459_02790) mecA 597066..597785 (-) 720 WP_001217724.1 adaptor protein MecA -
  VP459_RS02800 (VP459_02795) tnpA 598201..598686 (-) 486 WP_000093392.1 IS200/IS605 family transposase -
  VP459_RS02805 (VP459_02800) spxA 598898..599293 (-) 396 WP_000258001.1 transcriptional regulator SpxA -
  VP459_RS02810 (VP459_02805) trpS 599588..600577 (+) 990 WP_000448941.1 tryptophan--tRNA ligase -
  VP459_RS02815 (VP459_02810) - 600603..601112 (-) 510 Protein_558 transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38798.50 Da        Isoelectric Point: 9.5881

>NTDB_id=926132 VP459_RS02790 WP_000959294.1 595959..596945(-) (coiA) [Staphylococcus aureus strain M19060305]
MLVALNEEKERVLATTVLRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLLLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=926132 VP459_RS02790 WP_000959294.1 595959..596945(-) (coiA) [Staphylococcus aureus strain M19060305]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGTATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTTGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATTGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(5-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

98.78

100

0.988
  coiA Staphylococcus aureus MW2

97.561

100

0.976