Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | QUE39_RS00650 | Genome accession | NZ_AP025540 |
| Coordinates | 123105..124109 (+) | Length | 334 a.a. |
| NCBI ID | WP_011227724.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain HB8_001 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 118105..129109
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE39_RS00620 (TthHB8_01170) | - | 118256..119476 (+) | 1221 | WP_011227721.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| QUE39_RS00625 (TthHB8_01180) | - | 119486..120034 (+) | 549 | WP_011227722.1 | Uma2 family endonuclease | - |
| QUE39_RS00630 (TthHB8_01190) | - | 120012..120986 (-) | 975 | WP_011227723.1 | bifunctional oligoribonuclease/PAP phosphatase NrnA | - |
| QUE39_RS00640 (TthHB8_01200) | - | 121183..122070 (-) | 888 | WP_011174227.1 | acyltransferase | - |
| QUE39_RS00645 (TthHB8_01210) | era | 122115..123020 (-) | 906 | WP_008630929.1 | GTPase Era | - |
| QUE39_RS00650 (TthHB8_01220) | dprA | 123105..124109 (+) | 1005 | WP_011227724.1 | DNA-processing protein DprA | Machinery gene |
| QUE39_RS00655 (TthHB8_01230) | - | 124113..125021 (-) | 909 | WP_011227725.1 | manganese catalase family protein | - |
| QUE39_RS00660 (TthHB8_01240) | - | 125131..126084 (+) | 954 | WP_011227726.1 | hydrogen peroxide-inducible genes activator | - |
| QUE39_RS00665 (TthHB8_01250) | - | 126071..127027 (+) | 957 | WP_164926019.1 | branched-chain amino acid transaminase | - |
| QUE39_RS00670 (TthHB8_01260) | - | 127017..127205 (+) | 189 | WP_011174222.1 | hypothetical protein | - |
| QUE39_RS00675 (TthHB8_01270) | - | 127207..127446 (+) | 240 | WP_008630920.1 | hypothetical protein | - |
| QUE39_RS00680 (TthHB8_01280) | trmH | 127436..128020 (-) | 585 | WP_011174221.1 | tRNA (guanosine(18)-2'-O)-methyltransferase TrmH | - |
| QUE39_RS00685 (TthHB8_01290) | hisG | 128017..128637 (-) | 621 | WP_011174220.1 | ATP phosphoribosyltransferase | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 36145.98 Da Isoelectric Point: 6.5207
>NTDB_id=92601 QUE39_RS00650 WP_011227724.1 123105..124109(+) (dprA) [Thermus thermophilus strain HB8_001]
MDPLALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERGRAEALGVRLLGLWEEGFPEGLRALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARRLARELAEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDER
SLGANRLIQDGAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG
MDPLALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERGRAEALGVRLLGLWEEGFPEGLRALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARRLARELAEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDER
SLGANRLIQDGAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG
Nucleotide
Download Length: 1005 bp
>NTDB_id=92601 QUE39_RS00650 WP_011227724.1 123105..124109(+) (dprA) [Thermus thermophilus strain HB8_001]
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTTTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAAAGGGGGC
GCGCCGAGGCCCTAGGGGTGCGCCTCCTGGGCCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAGGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCCAGGAGGCTCGCCCGGGAGCTGGCCGAGGCCGGGCTTTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCTTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGGACCGGCCCTAAGCC
CGAGTTCTTTCCCCGGCGAAACCGCCTCATCGCCGGGCTTTGCCGGGCAGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCCTGGAGCTCGGCAAGGAGGTGCTGGCCGTGCCCGGAAGGCCCACGGACGAGCGC
TCCCTGGGGGCGAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGACGTCCTCTCCTACCTGGGAAT
GTCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAAGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTCCTCACCCTCTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTTTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAAAGGGGGC
GCGCCGAGGCCCTAGGGGTGCGCCTCCTGGGCCTCTGGGAGGAGGGCTTCCCCGAGGGGCTGAGGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCCCC
TTGGGCCCTGGCCTTTGCCAGGAGGCTCGCCCGGGAGCTGGCCGAGGCCGGGCTTTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCTTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGGACCGGCCCTAAGCC
CGAGTTCTTTCCCCGGCGAAACCGCCTCATCGCCGGGCTTTGCCGGGCAGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCCTGGAGCTCGGCAAGGAGGTGCTGGCCGTGCCCGGAAGGCCCACGGACGAGCGC
TCCCTGGGGGCGAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGACGTCCTCTCCTACCTGGGAAT
GTCCGCAAGGCCCAAGCCCCTCCCGGGCCTCTCCCCGGAGGAGGAAGCCCTTTACGCCCTCCTGCAGGAAAAGAAGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTCCTCACCCTCTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Thermus thermophilus HB27 |
98.503 |
100 |
0.985 |
| dprA | Vibrio campbellii strain DS40M4 |
38.268 |
100 |
0.41 |
| dprA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.89 |
87.425 |
0.401 |
| dprA | Vibrio cholerae strain A1552 |
37.255 |
100 |
0.398 |