Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | QMN04_RS09785 | Genome accession | NZ_AP025531 |
| Coordinates | 2088150..2088530 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain OCU-Ac19 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2083150..2093530
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMN04_RS09755 (OCUAc19_19020) | tadA | 2083268..2083771 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| QMN04_RS09760 (OCUAc19_19030) | - | 2083778..2084902 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| QMN04_RS09765 (OCUAc19_19040) | ung | 2084899..2085612 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| QMN04_RS09770 (OCUAc19_19050) | - | 2085663..2086259 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| QMN04_RS09775 (OCUAc19_19060) | gspK | 2086490..2087449 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| QMN04_RS09780 (OCUAc19_19070) | xcpW | 2087449..2088150 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| QMN04_RS09785 (OCUAc19_19080) | xcpV | 2088150..2088530 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| QMN04_RS09790 (OCUAc19_19090) | - | 2088520..2089074 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| QMN04_RS09795 (OCUAc19_19100) | - | 2089084..2089692 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| QMN04_RS09800 (OCUAc19_19110) | - | 2089730..2090503 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| QMN04_RS09805 (OCUAc19_19120) | - | 2090521..2090862 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| QMN04_RS09810 (OCUAc19_19130) | - | 2090874..2091854 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| QMN04_RS09815 (OCUAc19_19140) | kdsB | 2091866..2092627 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=92578 QMN04_RS09785 WP_000836911.1 2088150..2088530(-) (xcpV) [Acinetobacter baumannii strain OCU-Ac19]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=92578 QMN04_RS09785 WP_000836911.1 2088150..2088530(-) (xcpV) [Acinetobacter baumannii strain OCU-Ac19]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |