Detailed information NTG0092577

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: QMN04_RS09780
• Genome accession: NZ_AP025531
• Coordinates: 2087449..2088150 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain OCU-Ac19
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2082449..2093150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMN04_RS09750 (OCUAc19_19010)	-	2082755..2083198 (-)	444	WP_001246675.1	SRPBCC family protein	-
QMN04_RS09755 (OCUAc19_19020)	tadA	2083268..2083771 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
QMN04_RS09760 (OCUAc19_19030)	-	2083778..2084902 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
QMN04_RS09765 (OCUAc19_19040)	ung	2084899..2085612 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
QMN04_RS09770 (OCUAc19_19050)	-	2085663..2086259 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
QMN04_RS09775 (OCUAc19_19060)	gspK	2086490..2087449 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
QMN04_RS09780 (OCUAc19_19070)	xcpW	2087449..2088150 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
QMN04_RS09785 (OCUAc19_19080)	xcpV	2088150..2088530 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
QMN04_RS09790 (OCUAc19_19090)	-	2088520..2089074 (-)	555	WP_000841373.1	type II secretion system protein	-
QMN04_RS09795 (OCUAc19_19100)	-	2089084..2089692 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
QMN04_RS09800 (OCUAc19_19110)	-	2089730..2090503 (-)	774	WP_000497298.1	TatD family hydrolase	-
QMN04_RS09805 (OCUAc19_19120)	-	2090521..2090862 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
QMN04_RS09810 (OCUAc19_19130)	-	2090874..2091854 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
QMN04_RS09815 (OCUAc19_19140)	kdsB	2091866..2092627 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=92577 QMN04_RS09780 WP_000594589.1 2087449..2088150(-) (xcpW) [Acinetobacter baumannii strain OCU-Ac19]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=92577 QMN04_RS09780 WP_000594589.1 2087449..2088150(-) (xcpW) [Acinetobacter baumannii strain OCU-Ac19]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996