Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   VKP36_RS02250 Genome accession   NZ_CP142357
Coordinates   424822..425631 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain AW-534     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 419822..430631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP36_RS02230 (VKP36_02230) - 420264..421511 (+) 1248 WP_326625168.1 AMP-binding protein -
  VKP36_RS02235 (VKP36_02235) - 421567..422601 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  VKP36_RS02240 (VKP36_02240) vicR 422763..423473 (+) 711 WP_002985645.1 response regulator YycF Regulator
  VKP36_RS02245 (VKP36_02245) vicK 423466..424818 (+) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  VKP36_RS02250 (VKP36_02250) vicX 424822..425631 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  VKP36_RS02255 (VKP36_02255) rnc 426074..426766 (+) 693 WP_002990670.1 ribonuclease III -
  VKP36_RS02260 (VKP36_02260) smc 426767..430306 (+) 3540 WP_111704295.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=925374 VKP36_RS02250 WP_002985641.1 424822..425631(+) (vicX) [Streptococcus pyogenes strain AW-534]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=925374 VKP36_RS02250 WP_002985641.1 424822..425631(+) (vicX) [Streptococcus pyogenes strain AW-534]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758