Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | Llc71_RS12370 | Genome accession | NZ_AP025520 |
| Coordinates | 2403747..2404238 (-) | Length | 163 a.a. |
| NCBI ID | WP_042748007.1 | Uniprot ID | A0A084AC29 |
| Organism | Lactococcus cremoris strain 7-1 | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2398747..2409238
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Llc71_RS12370 (Llc71_24690) | comX | 2403747..2404238 (-) | 492 | WP_042748007.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| Llc71_RS12375 (Llc71_24700) | ezrA | 2404503..2406233 (-) | 1731 | WP_248536778.1 | septation ring formation regulator EzrA | - |
| Llc71_RS12380 (Llc71_24710) | tsf | 2406437..2407465 (-) | 1029 | WP_011677206.1 | translation elongation factor Ts | - |
| Llc71_RS12385 (Llc71_24720) | rpsB | 2407587..2408354 (-) | 768 | WP_011836067.1 | 30S ribosomal protein S2 | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 19714.49 Da Isoelectric Point: 6.2273
>NTDB_id=92534 Llc71_RS12370 WP_042748007.1 2403747..2404238(-) (comX) [Lactococcus cremoris strain 7-1]
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMERYRLREKIKNILFSR
DDD
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMERYRLREKIKNILFSR
DDD
Nucleotide
Download Length: 492 bp
>NTDB_id=92534 Llc71_RS12370 WP_042748007.1 2403747..2404238(-) (comX) [Lactococcus cremoris strain 7-1]
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTGGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAATCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAACGCTATCGGCTAAGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTGGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAATCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAACGCTATCGGCTAAGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Lactococcus lactis subsp. cremoris KW2 |
99.387 |
100 |
0.994 |
| comX | Lactococcus lactis subsp. lactis strain DGCC12653 |
76.074 |
100 |
0.761 |