Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   Llc71_RS12275 Genome accession   NZ_AP025520
Coordinates   2382229..2383515 (-) Length   428 a.a.
NCBI ID   WP_248536777.1    Uniprot ID   -
Organism   Lactococcus cremoris strain 7-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2377229..2388515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Llc71_RS12260 (Llc71_24510) - 2378420..2378956 (-) 537 WP_011836050.1 hypothetical protein -
  Llc71_RS12265 (Llc71_24520) - 2378963..2380294 (-) 1332 WP_046124361.1 FAD/NAD(P)-binding oxidoreductase -
  Llc71_RS12270 (Llc71_24530) - 2380309..2382159 (-) 1851 WP_011836051.1 proline--tRNA ligase -
  Llc71_RS12275 (Llc71_24540) eeP 2382229..2383515 (-) 1287 WP_248536777.1 RIP metalloprotease RseP Regulator
  Llc71_RS12280 (Llc71_24550) - 2383534..2384337 (-) 804 WP_011677190.1 phosphatidate cytidylyltransferase -
  Llc71_RS12285 (Llc71_24560) - 2384337..2385071 (-) 735 WP_011836054.1 isoprenyl transferase -
  Llc71_RS12290 (Llc71_24570) yajC 2385422..2385754 (-) 333 WP_011836055.1 preprotein translocase subunit YajC -
  Llc71_RS12295 (Llc71_24580) - 2385849..2386547 (-) 699 WP_046124362.1 DNA alkylation repair protein -
  Llc71_RS12300 (Llc71_24590) rlmH 2386565..2387044 (-) 480 WP_021037957.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46354.81 Da        Isoelectric Point: 6.5140

>NTDB_id=92532 Llc71_RS12275 WP_248536777.1 2382229..2383515(-) (eeP) [Lactococcus cremoris strain 7-1]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEISRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSLNLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=92532 Llc71_RS12275 WP_248536777.1 2382229..2383515(-) (eeP) [Lactococcus cremoris strain 7-1]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGCCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGGATTTTACCACTTGGGGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGCTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGTTTAAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TAGCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCACTTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTGTGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains


Predicted by InterproScan.

(217-279)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.916

100

0.563

  eeP Streptococcus thermophilus LMD-9

55.684

100

0.561


Multiple sequence alignment