Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   VKP40_RS08055 Genome accession   NZ_CP142355
Coordinates   1602852..1604111 (-) Length   419 a.a.
NCBI ID   WP_002993670.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain A946     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1597852..1609111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP40_RS08050 (VKP40_08050) - 1600798..1602654 (-) 1857 WP_109821194.1 proline--tRNA ligase -
  VKP40_RS08055 (VKP40_08055) eeP 1602852..1604111 (-) 1260 WP_002993670.1 RIP metalloprotease RseP Regulator
  VKP40_RS08060 (VKP40_08060) - 1604184..1604978 (-) 795 WP_002982606.1 phosphatidate cytidylyltransferase -
  VKP40_RS08065 (VKP40_08065) - 1604991..1605740 (-) 750 WP_010922683.1 isoprenyl transferase -
  VKP40_RS08070 (VKP40_08070) yajC 1605956..1606321 (-) 366 WP_002988027.1 preprotein translocase subunit YajC -
  VKP40_RS08075 (VKP40_08075) - 1606437..1606811 (-) 375 WP_080032259.1 thioredoxin domain-containing protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45718.48 Da        Isoelectric Point: 9.4314

>NTDB_id=925290 VKP40_RS08055 WP_002993670.1 1602852..1604111(-) (eeP) [Streptococcus pyogenes strain A946]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQGGTLYTLRMLPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGFVKRINLSQSKLDPTSLPMHVTGYDLEDQLSITGLVLEETKTYKVAHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNHVRVQENGAAAKAGLRDNDQIVAINGYKVTSWNDLTE
AVNLATRDLGPSQTIKVTYKSHQRLKTVAVKPQKHAKTYTIGVKASLKTGFKDKLLGGLELAWSGAFTILNALKGLITGF
SLNKLGGPVAMYDMSNQAAQNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPIKQETEAYITLAGVA
IMVVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=925290 VKP40_RS08055 WP_002993670.1 1602852..1604111(-) (eeP) [Streptococcus pyogenes strain A946]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGTATTTTAGTGATTGTCCATGAATTTGGACATTTCTATTTTGCTAA
AAAATCAGGCATTCTAGTAAGAGAATTTGCCATTGGAATGGGCCCTAAAATTTTTTCTCATGTTGACCAAGGAGGAACTC
TTTATACCTTGAGGATGTTACCCTTGGGCGGTTATGTACGAATGGCTGGTTGGGGTGATGACAAAACTGAGATCAAAACA
GGTACTCCAGCAAGTTTAACCCTTAATGAGCAAGGTTTTGTTAAGCGCATCAACTTGTCTCAAAGTAAGTTAGACCCAAC
GAGTCTCCCAATGCATGTTACAGGCTATGACTTAGAAGATCAGCTGAGTATTACTGGCTTGGTTTTAGAAGAAACCAAGA
CATATAAGGTCGCTCACGATGCTACTATTGTTGAAGAAGACGGTACTGAGATAAGAATTGCTCCGCTTGATGTTCAATAT
CAAAATGCTAGTATTGGCGGACGTTTAATCACCAATTTTGCAGGTCCCATGAATAATTTTATTTTAGGGATTGTGGTTTT
TATCCTCTTGGTCTTTTTACAAGGTGGGATGCCAGATTTTAGTAGCAATCATGTCCGTGTTCAAGAAAATGGAGCAGCAG
CTAAGGCTGGTCTTCGAGATAATGACCAAATTGTCGCAATTAATGGTTATAAGGTGACTAGCTGGAATGATCTCACTGAG
GCTGTAAACCTTGCAACACGGGATCTAGGCCCGTCACAGACCATTAAGGTCACCTACAAGTCACATCAGCGCTTAAAAAC
GGTGGCTGTGAAACCACAAAAGCATGCAAAGACATACACGATAGGAGTTAAGGCGAGTCTGAAAACAGGATTTAAGGATA
AGCTCTTAGGCGGTCTAGAATTAGCTTGGAGTGGGGCGTTTACTATTTTGAATGCTTTGAAAGGATTGATCACTGGCTTT
AGTCTCAATAAATTAGGTGGACCTGTTGCCATGTATGACATGTCCAATCAGGCTGCTCAAAACGGCTTAGAGTCAGTCTT
ATCTCTTATGGCAATGCTTTCGATCAATTTAGGGATCTTTAACCTGATTCCGATTCCTGCACTTGATGGGGGAAAAATCT
TGATGAATATCATTGAAGCCATTCGTCGCAAGCCTATCAAGCAAGAAACAGAGGCCTATATCACCCTAGCTGGGGTTGCT
ATCATGGTCGTATTGATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(206-271)

Peptidase family M50 (Peptidase_M50)

(6-405)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.571

100

0.687
  eeP Streptococcus thermophilus LMD-9

68.333

100

0.685