Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   AB5J48_RS18395 Genome accession   NZ_CP163433
Coordinates   4123035..4124159 (-) Length   374 a.a.
NCBI ID   WP_031020135.1    Uniprot ID   A0ACC6UQE7
Organism   Streptomyces sp. R17     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4118035..4129159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB5J48_RS18370 (AB5J48_18370) cseB 4118532..4119227 (-) 696 WP_006129595.1 two-component system response regulator CseB -
  AB5J48_RS18375 (AB5J48_18375) - 4119388..4120038 (-) 651 WP_006129594.1 hypothetical protein -
  AB5J48_RS18380 (AB5J48_18380) - 4120026..4120565 (-) 540 WP_006129593.1 SigE family RNA polymerase sigma factor -
  AB5J48_RS18385 (AB5J48_18385) - 4120848..4121783 (-) 936 WP_006129592.1 A/G-specific adenine glycosylase -
  AB5J48_RS18390 (AB5J48_18390) - 4122060..4122950 (+) 891 WP_078592159.1 hypothetical protein -
  AB5J48_RS18395 (AB5J48_18395) disA 4123035..4124159 (-) 1125 WP_031020135.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AB5J48_RS18400 (AB5J48_18400) radA 4124229..4125641 (-) 1413 WP_006129589.1 DNA repair protein RadA Machinery gene
  AB5J48_RS18405 (AB5J48_18405) - 4126353..4128155 (+) 1803 WP_006129588.1 sigma-70 family RNA polymerase sigma factor -
  AB5J48_RS18410 (AB5J48_18410) - 4128217..4129107 (-) 891 WP_369151621.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40014.71 Da        Isoelectric Point: 5.0029

>NTDB_id=925102 AB5J48_RS18395 WP_031020135.1 4123035..4124159(-) (disA) [Streptomyces sp. R17]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEALCSGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALHELDALTHAELLELPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=925102 AB5J48_RS18395 WP_031020135.1 4123035..4124159(-) (disA) [Streptomyces sp. R17]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCACCCGGTACCGCCCTGCGTGACGGCCTGGAGCGCGTGCTCCGCGGCAACACGGGCGGGCTCATCGTGC
TCGGCTCGGACAAGACCGTCGAGGCGCTGTGCAGCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACCCGACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTGAGCAAGCAGGTCGGCTTCCCTG
TGGTCTCCGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCCACCCTGGAGCGCTACAAGCTCCGTCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACCGACGGCCGTCTTCTCGCCCTCCAGCTCGACGAGTTGATCGCC
GGCGTGGAGCCGGAACGCGAACTGGTCGTACGGGACTACGTCCCCGAGCCGACCGCGAAGCGCTCCCGCACGGTCGACGA
GGCGCTGCACGAGCTGGACGCGCTCACCCACGCGGAGCTGCTGGAACTGCCGACGGTGGCGCGTGCGCTCGGCTACACCG
GCTCCCCGGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGCCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTCTCCCGCCTGGCGGAAAGCAGCATCCTCGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.821

92.513

0.433