Detailed information NTG0925083

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: AB5J48_RS10815
• Genome accession: NZ_CP163433
• Coordinates: 2470041..2471327 (-)
• Length: 428 a.a.
• NCBI ID: WP_006133586.1
• Uniprot ID: M3BU63
• Organism: Streptomyces sp. R17
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2465041..2476327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J48_RS10800 (AB5J48_10800)	-	2465221..2467845 (-)	2625	WP_006133581.1	valine--tRNA ligase	-
AB5J48_RS10805 (AB5J48_10805)	-	2467982..2468998 (+)	1017	WP_189406147.1	hypothetical protein	-
AB5J48_RS10810 (AB5J48_10810)	-	2469036..2469974 (+)	939	WP_369150410.1	hypothetical protein	-
AB5J48_RS10815 (AB5J48_10815)	clpX	2470041..2471327 (-)	1287	WP_006133586.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
AB5J48_RS10820 (AB5J48_10820)	clpP	2471510..2472217 (-)	708	WP_006133588.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J48_RS10825 (AB5J48_10825)	-	2472328..2472933 (-)	606	WP_006133589.1	ATP-dependent Clp protease proteolytic subunit	-
AB5J48_RS10830 (AB5J48_10830)	tig	2473235..2474629 (-)	1395	WP_189406149.1	trigger factor	-
AB5J48_RS10845 (AB5J48_10845)	-	2475184..2475378 (-)	195	WP_006133597.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46727.48 Da
• Isoelectric Point: 4.6906

>NTDB_id=925083 AB5J48_RS10815 WP_006133586.1 2470041..2471327(-) (clpX) [Streptomyces sp. R17]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGATIISKQEREAKDQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=925083 AB5J48_RS10815 WP_006133586.1 2470041..2471327(-) (clpX) [Streptomyces sp. R17]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAGCTCGCCGAGACCA
GCGAGGTCCGCTGGGAGGAGCTTCCCAAACCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTGGGCCAGGAGGCG
GCCAAGAAGGCGCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGGGAGAACGGCGGCGCCCAGGGCCG
TGACGACGCCATCGAGCTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTGCTGGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGGAAGAGCGAAAACCCGTCGATCACCCGGGACGTGAGCGGCGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTCGAGGGCACCACCGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCCGGACTGGAGAAGATCATCGAGGGCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCATCTCCAAGCAGGAGCGGGAGGCCAAGGACCAGTTCGAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCCGTCATCACCAGCGTGCACAACCTCGACCGT
GAGGCGCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGTCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCGGACGTGGTGCTCTCCAACGTCAACCCGACCCTCATCCCGCGCGACTCGCGCGGCCGCGGCTCGGGCGAGCAGAAGAC
GGCCTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

3D structure

• AlphaFold DB: M3BU63

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526