Detailed information NTG0092503

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JE76HU_RS23400
• Genome accession: NZ_AP028094
• Coordinates: 4633140..4634165 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain JNE132847
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4628140..4639165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JE76HU_RS23370 (O76HUS_44570)	zapB	4628224..4628469 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
JE76HU_RS23375 (O76HUS_44580)	rraA	4628554..4629039 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JE76HU_RS23380 (O76HUS_44590)	menA	4629132..4630058 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JE76HU_RS23385 (O76HUS_44600)	hslU	4630125..4631456 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
JE76HU_RS23390 (O76HUS_44610)	hslV	4631466..4631996 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JE76HU_RS23395 (O76HUS_44620)	ftsN	4632089..4633048 (-)	960	WP_000068834.1	cell division protein FtsN	-
JE76HU_RS23400 (O76HUS_44630)	cytR	4633140..4634165 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JE76HU_RS23405 (O76HUS_44640)	priA	4634321..4636519 (-)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
JE76HU_RS23410 (O76HUS_44650)	rpmE	4636722..4636934 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=92503 JE76HU_RS23400 WP_000644904.1 4633140..4634165(-) (cytR) [Escherichia coli strain JNE132847]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=92503 JE76HU_RS23400 WP_000644904.1 4633140..4634165(-) (cytR) [Escherichia coli strain JNE132847]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628