Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   AB5J55_RS24180 Genome accession   NZ_CP163432
Coordinates   5210402..5211526 (-) Length   374 a.a.
NCBI ID   WP_328425026.1    Uniprot ID   -
Organism   Streptomyces sp. R11     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5205402..5216526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB5J55_RS24145 (AB5J55_24145) - 5205462..5206397 (-) 936 WP_369272661.1 A/G-specific adenine glycosylase -
  AB5J55_RS24150 (AB5J55_24150) - 5206666..5207199 (+) 534 WP_369272662.1 hypothetical protein -
  AB5J55_RS24155 (AB5J55_24155) - 5207222..5207332 (+) 111 Protein_4755 histidine kinase -
  AB5J55_RS24160 (AB5J55_24160) - 5207571..5208038 (+) 468 WP_369272663.1 histidine kinase -
  AB5J55_RS24165 (AB5J55_24165) - 5208035..5208694 (+) 660 WP_369272664.1 response regulator -
  AB5J55_RS24170 (AB5J55_24170) - 5208698..5209330 (-) 633 WP_369272665.1 phosphatase PAP2 family protein -
  AB5J55_RS24175 (AB5J55_24175) - 5209517..5210350 (+) 834 WP_369272666.1 hypothetical protein -
  AB5J55_RS24180 (AB5J55_24180) disA 5210402..5211526 (-) 1125 WP_328425026.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AB5J55_RS24185 (AB5J55_24185) radA 5211607..5213016 (-) 1410 WP_369272667.1 DNA repair protein RadA Machinery gene
  AB5J55_RS24190 (AB5J55_24190) - 5213226..5215010 (+) 1785 WP_369272668.1 hypothetical protein -
  AB5J55_RS24195 (AB5J55_24195) - 5215034..5215903 (-) 870 WP_369272669.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40083.83 Da        Isoelectric Point: 5.0029

>NTDB_id=925029 AB5J55_RS24180 WP_328425026.1 5210402..5211526(-) (disA) [Streptomyces sp. R11]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEVMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=925029 AB5J55_RS24180 WP_328425026.1 5210402..5211526(-) (disA) [Streptomyces sp. R11]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTTGAGCGGATCCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAGGTGATGTGCACGGGCGGATTCGTCCTGGATGTCGAGTTCACGGCGACGCGACTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCGTCGGACCTGTCGAAGATCCTTCGCGCGGGCGTCCAGCTGGTCCC
GGACCCGACGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCCATGCGGCTGATCGCGCTCTACGTCGACGGCCACCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTCGTGACGGTCCGCGACGTCTCCGCGGTCGCCCAGCGCCTGGAGATGGTCCGGCGCATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGCACGGACGGACGGCTCCTGGCCCTCCAGCTGGACGAGTTGATCGCG
GGTGTGGAGCCCGAGCGCGAACTCGTGGTGCGCGACTACGTCCCCGAGCCGACGGCGAAGCGCTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGGACGCGCTCACCCACGCCGAGCTTCTCGAACTGTCCACGGTGGCAAGGGCGTTGGGCTACACCG
GATCCCCGGAGGCGCTGGACTCCGCGGTCTCCCCGCGCGGCTTCCGCCTCCTGGCCAAGGTGCCGAGGCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGCGTCCGTGAGGGCCTGTCGCGGTTGGCGGAGAGCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441