Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   VKP56_RS09000 Genome accession   NZ_CP142350
Coordinates   1804330..1805106 (+) Length   258 a.a.
NCBI ID   WP_326657087.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain SS1445     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1799330..1810106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP56_RS08980 (VKP56_08980) - 1801158..1801932 (-) 775 Protein_1712 IS30 family transposase -
  VKP56_RS08990 (VKP56_08990) rlmH 1802327..1802806 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  VKP56_RS08995 (VKP56_08995) htrA 1803018..1804241 (+) 1224 WP_326657085.1 S1C family serine protease Regulator
  VKP56_RS09000 (VKP56_09000) spo0J 1804330..1805106 (+) 777 WP_326657087.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29055.88 Da        Isoelectric Point: 10.2588

>NTDB_id=925020 VKP56_RS09000 WP_326657087.1 1804330..1805106(+) (spo0J) [Streptococcus pyogenes strain SS1445]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPVPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=925020 VKP56_RS09000 WP_326657087.1 1804330..1805106(+) (spo0J) [Streptococcus pyogenes strain SS1445]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAACCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGTATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGTACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTACTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(149-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585