Detailed information NTG0924834

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: AB5J57_RS11580
• Genome accession: NZ_CP163429
• Coordinates: 2626707..2627993 (-)
• Length: 428 a.a.
• NCBI ID: WP_369155956.1
• Uniprot ID: -
• Organism: Streptomyces sp. R02
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2621707..2632993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J57_RS11565 (AB5J57_11565)	-	2621942..2624566 (-)	2625	WP_369155953.1	valine--tRNA ligase	-
AB5J57_RS11570 (AB5J57_11570)	-	2624703..2625704 (+)	1002	WP_369155954.1	hypothetical protein	-
AB5J57_RS11575 (AB5J57_11575)	-	2625742..2626641 (+)	900	WP_369155955.1	hypothetical protein	-
AB5J57_RS11580 (AB5J57_11580)	clpX	2626707..2627993 (-)	1287	WP_369155956.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
AB5J57_RS11585 (AB5J57_11585)	clpP	2628176..2628883 (-)	708	WP_006133588.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J57_RS11590 (AB5J57_11590)	-	2628994..2629599 (-)	606	WP_006133589.1	ATP-dependent Clp protease proteolytic subunit	-
AB5J57_RS11595 (AB5J57_11595)	tig	2629900..2631294 (-)	1395	WP_369155957.1	trigger factor	-
AB5J57_RS11610 (AB5J57_11610)	-	2631850..2632044 (-)	195	WP_006133597.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46713.46 Da
• Isoelectric Point: 4.6877

>NTDB_id=924834 AB5J57_RS11580 WP_369155956.1 2626707..2627993(-) (clpX) [Streptomyces sp. R02]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGATIISKQERDAKDQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=924834 AB5J57_RS11580 WP_369155956.1 2626707..2627993(-) (clpX) [Streptomyces sp. R02]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCA
GCGAGGTCCGCTGGGAGGAGCTCCCCAAACCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTGGGGCAGGAGGCG
GCCAAGAAGGCGCTCTCCGTGGCCGTCTACAACCACTACAAGCGCGTCCAGGCCGGGGAGAACGGCGGCGCACAGGGCCG
TGACGACGCCATCGAGCTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTGCTGGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGGAAGAGCGAAAACCCGTCGATCACCCGGGACGTGAGCGGCGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTCGAGGGCACCACCGCCTCGGTTCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCCGGTCTGGAGAAGATCATCGAGGGCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCATCTCCAAGCAGGAGCGGGACGCCAAGGACCAGTTCGAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCCGTCATCACCAGCGTGCACAACCTCGACCGT
GAGGCGCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGTGTGGTCATCACC
GCGGACGTGGTGCTCTCCAACGTGAACCCGACGCTCATCCCGCGCGACTCGCGTGGCCGCGGCTCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523