Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   AB0R08_RS02225 Genome accession   NZ_CP162609
Coordinates   469911..471035 (-) Length   374 a.a.
NCBI ID   WP_006125491.1    Uniprot ID   A0ABT7DGV6
Organism   Streptomyces sp. 1268     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 464911..476035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R08_RS02200 cseB 465363..466076 (-) 714 WP_032766497.1 two-component system response regulator CseB -
  AB0R08_RS02205 - 466111..466785 (-) 675 WP_408990909.1 hypothetical protein -
  AB0R08_RS02210 - 466872..467543 (-) 672 WP_408990910.1 SigE family RNA polymerase sigma factor -
  AB0R08_RS02215 - 467714..468628 (-) 915 WP_093807455.1 A/G-specific adenine glycosylase -
  AB0R08_RS02220 - 468934..469668 (+) 735 WP_408994680.1 hypothetical protein -
  AB0R08_RS02225 disA 469911..471035 (-) 1125 WP_006125491.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AB0R08_RS02230 radA/sms 471116..472528 (-) 1413 WP_032781150.1 DNA repair protein RadA Machinery gene
  AB0R08_RS02235 - 472748..474712 (+) 1965 WP_408990911.1 BACON domain-containing protein -
  AB0R08_RS02240 - 474823..475686 (-) 864 WP_107412083.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40412.35 Da        Isoelectric Point: 4.9406

>NTDB_id=924030 AB0R08_RS02225 WP_006125491.1 469911..471035(-) (disA) [Streptomyces sp. 1268]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=924030 AB0R08_RS02225 WP_006125491.1 469911..471035(-) (disA) [Streptomyces sp. 1268]
GTGGCAGCCAACGACCGGGCGACGACGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAATACCGGTGGCCTGATCGTGC
TGGGCATGGACCGGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCGTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGGGCCAATCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGCCTTGAGATGGTGCGGCGGATCG
CCACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGGTTGCTCTCCCTCCAGCTGGACGAGCTGATCGCG
GGGGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGACTACGTCCCCGAGCCGACGGCGAAACGGTCGCGCACGGTGGCCGA
GGCGCTGACCGAGCTGGACTCCCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCCCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGGCTTCAGAAGCTTCTCGCCGCGAGCGTGGACGATCTCCAGACGGTGGA
CGGGGTGGGCGAAGCCCGGGCCCGGAGTGTCCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAACGCTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436