Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QUE82_RS04700 Genome accession   NZ_AP028059
Coordinates   922751..923545 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain NARUSE     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 917751..928545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUE82_RS04670 (BSNN_08870) sxzA 918591..919622 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  QUE82_RS04675 (BSNN_08880) yfhB 919737..920618 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  QUE82_RS04680 (BSNN_08890) yfhC 920706..921290 (+) 585 WP_033881364.1 nitroreductase -
  QUE82_RS04685 (BSNN_08900) yfhD 921329..921520 (-) 192 WP_014479215.1 YfhD family protein -
  QUE82_RS04690 yfhE 921586..921696 (-) 111 WP_003223230.1 YfhE family protein -
  QUE82_RS04695 (BSNN_08910) yfhF 921751..922662 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  QUE82_RS04700 (BSNN_08920) recX 922751..923545 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  QUE82_RS04705 (BSNN_08930) yfhH 923547..923861 (+) 315 WP_003244592.1 YfhH family protein -
  QUE82_RS04710 (BSNN_08940) yfhI 924004..925197 (+) 1194 WP_003243500.1 MFS transporter -
  QUE82_RS04715 (BSNN_08950) sspK 925229..925381 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QUE82_RS04720 (BSNN_08960) yfhJ 925506..925775 (+) 270 WP_003243789.1 YfhJ family protein -
  QUE82_RS04725 (BSNN_08970) yfhK 925920..926438 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  QUE82_RS04730 (BSNN_08980) spdL 926523..926855 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  QUE82_RS04735 (BSNN_08990) ephM 926842..927702 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=92313 QUE82_RS04700 WP_014479217.1 922751..923545(+) (recX) [Bacillus subtilis subsp. natto strain NARUSE]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=92313 QUE82_RS04700 WP_014479217.1 922751..923545(+) (recX) [Bacillus subtilis subsp. natto strain NARUSE]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment