Detailed information NTG0092227

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: vsple_RS11305
• Genome accession: NZ_AP025503
• Coordinates: 2591387..2594776 (+)
• Length: 1129 a.a.
• NCBI ID: WP_261882055.1
• Uniprot ID: -
• Organism: Vibrio pelagius strain ATCC 25916
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2586387..2599776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
vsple_RS11285	erpA	2586732..2587073 (-)	342	WP_032551754.1	iron-sulfur cluster insertion protein ErpA	-
vsple_RS11290	hemL	2587371..2588660 (+)	1290	WP_255229973.1	glutamate-1-semialdehyde 2,1-aminomutase	-
vsple_RS11295	-	2588971..2590056 (+)	1086	WP_255229972.1	AI-2E family transporter	-
vsple_RS11300	rsmC	2590147..2591169 (+)	1023	WP_261882054.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
vsple_RS11305	chiS	2591387..2594776 (+)	3390	WP_261882055.1	response regulator	Regulator
vsple_RS11310	-	2595602..2597284 (+)	1683	WP_255229968.1	ABC transporter substrate-binding protein	-
vsple_RS11315	-	2597455..2598441 (+)	987	WP_255229967.1	ABC transporter permease	-
vsple_RS11320	-	2598444..2599469 (+)	1026	WP_255229966.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127091.81 Da
• Isoelectric Point: 5.4194

>NTDB_id=92227 vsple_RS11305 WP_261882055.1 2591387..2594776(+) (chiS) [Vibrio pelagius strain ATCC 25916]
MFRFYRKQKFKRLQSTLMLAFLVLSLTPVTLIAVFFLQSHSQDLQEQSTSYLVSVRDTKQQQIIDYLEAQESQVIGFVRS
ELAIASGGRFYGLINAFQRLGLDIEEARSNAQQRYIQGSGNEVKTSILPESSSYVGSERYRLLHKRYHNAYLELIKRADF
DDILLVDINGNVAYSVFKHDNYGTNLLTGKYKDSNLGLTFQKLAKDVTEKRKINEDYTPVIVSDFLDENGKQSAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNMQTLLVGSDHLPRSLAHSQQAIDLSLDVIDKALAGETAVGTFNNSLNQA
IIAAYAPIKLDYANWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFAASHYLSNFITSPLLKLTWAAEKVSAGDLDE
AMINTERKDEIGRLAVSFERMQRSIREKMRLIKSQNEELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGSKPIRI
INQVPTDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEHLEHIFEPLIQAGQEAS
SYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLATPEELEHYSESSSYSHFQAPEVLESSQQDNSEIHEDP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPDTIELIEKEKPELLLLDIMMPGMSGYQVCETLRKQYDHAQLPII
MLTALNQPEDRVRGFEVGANDYLSKPFNKQELAARITAHLSASKAEQRRIENDQLQQELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANDAAAKLFKRSQEQLKRSMADEIIAPKYLRIDQAHYCGEIDVYISDTRQRVSSDILKLPEG
SGLDTMYIFNVGGAVNSNRINDLETAIEALSSYAFEGDKDKLQQLKELGGEFTRLADKAAGEGKNKQELMREVLVEAMTN
ALTYWESVTGESKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEFILDHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=92227 vsple_RS11305 WP_261882055.1 2591387..2594776(+) (chiS) [Vibrio pelagius strain ATCC 25916]
ATGTTTAGATTCTATCGAAAGCAGAAGTTTAAGCGCCTTCAAAGCACGCTCATGCTAGCGTTTCTCGTGTTAAGTCTGAC
TCCTGTTACTCTTATCGCAGTCTTTTTCCTCCAATCTCATAGTCAAGATCTGCAAGAGCAGAGTACCTCCTATTTAGTCT
CAGTTCGTGATACCAAACAACAACAGATCATTGATTACCTAGAAGCTCAAGAGTCTCAAGTGATTGGTTTTGTCCGTTCA
GAGTTGGCTATCGCCAGTGGTGGGCGTTTCTATGGCCTTATTAATGCTTTTCAACGCCTCGGCTTAGACATCGAAGAAGC
ACGTAGCAATGCGCAACAACGCTATATTCAAGGTTCGGGTAATGAGGTAAAAACGTCAATTTTACCGGAGTCGAGTAGCT
ACGTTGGCAGTGAGCGTTATCGCCTACTTCATAAACGCTACCACAATGCCTATCTAGAGCTGATCAAACGTGCCGATTTT
GACGATATTCTTCTAGTCGATATCAACGGCAATGTGGCCTATTCGGTATTTAAGCATGATAACTACGGTACTAATCTACT
CACTGGCAAATACAAAGATTCAAACCTTGGGCTCACTTTCCAAAAATTGGCTAAAGACGTAACAGAAAAGCGCAAAATTA
ACGAAGATTACACTCCAGTGATCGTTTCTGATTTCTTAGACGAAAACGGCAAACAGAGCGCTTGGCTAGGTGCCCCTATT
GTTCAGCAAGGTTACCTACACAGCTACGCAATGTTCCGACTGCCAATCAACGGCATCACTAAGCTGATTGCGGATCTCAA
CAAGAGCTCAAACATGCAGACTCTTCTTGTGGGTAGTGACCACCTCCCGAGAAGCCTGGCGCATTCTCAACAAGCCATCG
ACCTTAGCTTGGATGTGATAGATAAAGCGTTAGCAGGTGAGACGGCAGTTGGTACTTTCAACAACAGTTTGAATCAGGCC
ATTATTGCAGCATACGCGCCAATCAAGTTGGATTACGCAAACTGGGCGCTGGTGGTTGAACTGCCAGAAAAAGAAGCCTT
TGCTCGAATCCATCAGCTTGAAAAAATCTTCGTCATCGTGATGTTAACCGCTATCATACTGGTGTTTGCTGCGTCTCATT
ACCTGTCTAATTTCATTACTTCTCCCCTGCTTAAGCTCACTTGGGCTGCCGAAAAAGTCTCAGCAGGCGATCTTGATGAA
GCGATGATCAACACCGAACGAAAAGATGAAATAGGACGCCTAGCGGTAAGCTTTGAGCGTATGCAGCGCTCCATTCGTGA
AAAGATGCGCTTAATCAAATCACAAAATGAAGAGCTTGAAGATAACCTCAAGACCATCCAAAAGCAGAACGAGGAGTTAC
AACTCGCCAACAAGCTCAAAGATGAATTCCTCGCTACGACCTCGCATGAACTGCGCACTCCTTTGCACGGCATGGTAGGT
ATTGCGGAGGCATTAATCTCTGGCGCGAATGGTCCTATCCCAGCAAACCAGAAATACCAACTGGATATCATCATCAACAG
TGGTCAGCGCCTCGCTACACTGGTCGATGACCTTCTTGATTATCACAAAATGCGTTATGGCAGTTTAGACATTAAAAAGT
CTGCTGTTGACCTCTCTGCTGCGACCAGCTTGGTACTTGAGCTATCACATCATCTACTTGGCAGTAAACCCATTCGTATC
ATCAACCAAGTTCCAACGGACTTAGGTCTTGTATCATCTGACCCGCAACGCCTAGAGCAGGTGATGTATAACTTGGTTGG
TAATGCCATTAAGTACACCTCAGAGGGCAAAATCGTCATCTCTGCGAGTGTCATTGACGACAATATTCGCGTTCAGGTAG
TCGATACTGGCCAAGGTATCCCAGCAGAGCATTTAGAACATATTTTTGAACCGTTAATTCAAGCAGGGCAAGAAGCAAGT
TCATATCGACAAGGCGCGGGGCTTGGGCTATCGATCAGCCGTCAATTGATTGAATTAATGGGTGGTTCACTCTATGTCAG
CAGCCAGCCGATGGTGGGAACAACATTCAGTTTCACCTTACCACTCGCCACACCGGAAGAGCTTGAACACTACAGTGAAT
CTAGCAGTTACTCACACTTCCAAGCTCCAGAAGTACTAGAGAGTAGCCAACAAGATAACAGTGAGATCCACGAAGACCCA
GACGGCCCGCTATTAGTGATTGCCGATGATGAACCGGTTAACCTGCGCGTACTTGATAGCTTCTTAAAGCTGGAAGGCTA
CCGTGTTCGTACCGCTTGCGATGGTCCGGATACCATTGAGTTAATCGAAAAAGAGAAACCAGAGCTGTTACTGCTCGACA
TCATGATGCCAGGTATGAGCGGCTACCAAGTATGTGAAACACTAAGAAAGCAGTATGACCACGCACAATTGCCAATCATT
ATGCTGACCGCATTGAACCAACCCGAAGACCGCGTACGAGGCTTTGAGGTTGGCGCTAATGATTACCTATCAAAACCATT
TAATAAACAGGAACTAGCGGCGCGAATCACGGCGCATTTATCAGCAAGTAAAGCGGAGCAAAGACGCATCGAGAACGATC
AACTGCAACAAGAGTTGAAACATCGCGCAATGGTAGAAGCCAACCTGCTTGAAACCCAAGGTCGACTGCTTGAGCAATTA
GAATCAGCGCCTGAAGCGATCATATGCATTCGTGATGACCAACGTATTCGCTTTGCGAATGACGCTGCCGCAAAACTCTT
TAAACGCAGCCAAGAGCAACTCAAACGCTCAATGGCTGATGAGATCATCGCCCCTAAGTACTTACGCATAGACCAAGCGC
ACTACTGTGGCGAGATTGATGTCTACATCAGTGATACTCGCCAACGAGTGTCAAGTGACATTCTCAAGCTCCCAGAAGGC
TCAGGGTTAGATACCATGTATATTTTCAACGTCGGTGGTGCAGTAAACTCAAATCGTATCAATGACCTAGAAACAGCCAT
AGAAGCGCTATCAAGCTATGCGTTTGAAGGCGACAAGGACAAACTGCAGCAACTAAAAGAGCTGGGGGGCGAGTTTACTC
GCCTTGCTGACAAGGCTGCCGGTGAAGGCAAGAATAAACAAGAGTTAATGCGAGAGGTGCTTGTTGAAGCCATGACCAAC
GCCCTTACCTATTGGGAGTCGGTTACCGGAGAAAGTAAATTTGCCTTCGCTGAAAAGAGTGGCTTATGGCGTGTCTACCT
CGACAGAAGTACATTGCAAACCCGAACACTAGATAAGTACTTGCGCGTAGAAACTCTGCCTAAGACACCTCGCTGGCGCA
CCGTATTGAGCTCTCTTGAATTTATTCTGGATCACTGTAAAGAACAAACGCCGGAAAGAACTCATATTGAGATGCTCCGA
GATAAGCTACAAAAGCTCCTCACAAGCTAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS domain (PAS_8) (880-916)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.616	100	0.766