Detailed information NTG0092188

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCV49_RS02785
• Genome accession: NZ_AP025499
• Coordinates: 564859..568248 (-)
• Length: 1129 a.a.
• NCBI ID: WP_192852286.1
• Uniprot ID: -
• Organism: Vibrio lentus strain LMG 21034
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 559859..573248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV49_RS02770	-	560283..561308 (-)	1026	WP_065102991.1	ABC transporter permease	-
OCV49_RS02775	-	561311..562297 (-)	987	WP_004734532.1	ABC transporter permease	-
OCV49_RS02780	-	562467..564149 (-)	1683	WP_192852287.1	ABC transporter substrate-binding protein	-
OCV49_RS02785	chiS	564859..568248 (-)	3390	WP_192852286.1	response regulator	Regulator
OCV49_RS02790	rsmC	568465..569487 (-)	1023	WP_192852285.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCV49_RS02795	-	569598..570683 (-)	1086	WP_017106924.1	AI-2E family transporter	-
OCV49_RS02800	hemL	571005..572312 (-)	1308	WP_017106926.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCV49_RS02805	erpA	572609..572950 (+)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127363.09 Da
• Isoelectric Point: 5.4314

>NTDB_id=92188 OCV49_RS02785 WP_192852286.1 564859..568248(-) (chiS) [Vibrio lentus strain LMG 21034]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYQELLKRSDF
DDILLVDINGNVAYSVFKRDDYGTNLVTGKYKDSNLGLTFQRLAKDVREKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGSDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTLDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVVVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMLLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDSYNESGSYSHFQAPDLIDNTQQENSAISEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQRRLLEQL
ESAPEAIICIREDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVEAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRFETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=92188 OCV49_RS02785 WP_192852286.1 564859..568248(-) (chiS) [Vibrio lentus strain LMG 21034]
ATGTTTAGATTCTATCGAAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGTTGGCGTTTCTCGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATCTTTTTCCTCCAATCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCGCACCTTGTTT
CGGTCCGTGATACTAAGCAGCAGCAAATCGTCGATTACCTACAGGCGCAAGAATCACAAGTGATGGGCTTCGTTCGCTCT
GAGCTAGCCAATGCCAGTGGTGGACGTTTCTACGGTTTAATCAATGCCTTTCAACGACTCGGCTTAGATATTGATGAAGC
GCGCAGCAATGCTCAACAGCGCTACATTCAAGGATCAGGCGATCAAATCAAAACATCTATCCTACCTGAATCGAGTAGTT
TCATTGGAAGTGAACGCTATCGCTTGCTGCATAAGCGCTACCATAACTCATACCAAGAACTGCTTAAGCGTTCAGATTTC
GATGACATTTTACTGGTCGACATTAATGGCAACGTCGCTTATTCCGTATTTAAACGTGATGATTACGGTACCAACTTAGT
CACAGGTAAATACAAAGATTCAAATCTAGGCCTTACCTTTCAACGACTAGCAAAAGACGTAAGAGAAAAACGTAAATCTA
ATGAAGACTATACGCCAGTTATCGTTTCAGACTTTAAAGACGAGAACGGTAAACAGACTGCATGGTTAGGTGCGCCAATT
GTTCAACAAGGCTATCTGCACAGCTATGCCATGTTTCGACTGCCTATCAACGGCATTACCAAGCTTATTGCGGATCTAAA
CAAGAGCTCTAATATTCAAACACTTCTTGTTGGTAGTGACCACTTACCTCGCAGCCTAGCTCACTCTCAAGAATCGATTA
ACCTGAGCTTAGATGTTGTCGACAAAGCTCTGGCTGGTGAAACAGCAGTAGGCACGTTTGACAACACTCTCGATCAAGCG
ATCATCGCCGCTTACACCCCTATTGAATTGAAGTACGCAACTTGGGCTCTCGTCGTTGAGCTTCCAGAAAAAGAGGCGTT
TGCTCGCATTCATCAATTAGAAAAGATCTTCGTGATTGTGATGCTGACAGCGATCATTCTCGTAGTCGTTGCATCGCACT
ACTTATCGAACTTCATCACCTCGCCATTGTTAAAGCTCACTTGGGCCGCCGAGAAGGTCTCCGCAGGCGATCTTGACGAA
ACGATGATCAATACCGAGCGTAAAGATGAAATAGGTCGCCTAGCGGTCAGCTTTGAAAGGATGCAGCGTTCTATTCGTGA
AAAAATGCTGCTGATTAAAAGTCAAAATGATGAGTTAGAGGACAACCTCAAAACGATTCAAAAACAAAATGAAGAGTTAC
AGCTTGCCAATAAACTGAAAGATGAATTCTTGGCGACGACTTCGCATGAACTCAGAACCCCACTGCATGGCATGGTTGGT
ATTGCTGAGGCGCTGATATCTGGAGCAAACGGCCCTATTCCTGCCAACCAGAAGTACCAGTTGGATATCATCATCAATAG
TGGTCAGAGATTAGCAACCTTGGTTGATGACCTGCTCGATTACCACAAGATGCGCTATGGCAGCTTAGATATTAAGAAAT
CAGCCGTGGATTTGTCTGCGGCCACCAGCTTAGTGCTTGAGTTATCTCATCACCTGCTAGGCAACAAACCGATCCGCATT
ATCAACCAAGTGCCAAGTGATTTAGGGTTAGTCTCATCTGATCCTCAACGACTGGAACAAGTGATGTATAACTTGGTCGG
CAATGCTATTAAGTACACATCCGAAGGTAAAATTGTTATCTCAGCGAGTGTTATCGACGACAACATTCGAGTTCAAGTTG
TCGATACCGGCCAAGGTATCCCAGCAGAGTACCTAGAACATATCTTTGAACCACTGATTCAAGCAGGACAAGACTCAAGT
AACTATCGCCAAGGTGCAGGACTTGGGTTGTCCATTAGCCGCCAGCTGATTGAGCTAATGGGTGGCTCGCTGTACGTAAG
TAGCCAACCTATGCTTGGGACGACCTTCAGCTTCACATTACCTTTAGCTACCCAAGAAGAATTGGATAGTTACAATGAAT
CAGGGAGCTACTCACACTTCCAAGCGCCTGATTTGATTGATAACACTCAGCAAGAAAATAGCGCTATCAGTGAAGACCCG
AATGGCCCGCTGTTAGTCATTGCTGATGATGAGCCGGTAAACCTACGCGTGCTAGACAGCTTCTTGAAATTGGAAGGTTA
TCGAGTTCGCACTGCATGTGACGGCCCAGAAACCATCGAGTTGATTGAGAAAGAGAAACCAGAATTACTTCTGCTCGACA
TCATGATGCCAGGCATGAGCGGCTATCAGGTTTGTGAAGCACTGCGTAAGCAATACGATCATGCACAATTGCCAATCATC
ATGCTCACAGCTCTTAATCAAGCAGAAGACCGTGTTCGTGGCTTTGAAGCAGGTGCCAACGATTACTTGTCCAAGCCGTT
TAACAAACAGGAACTGGCGGCTCGAATCACAGCGCATTTATCGGCAAGTAAGGCTGAACAGAGGCGCCTTGAGAATGACC
AGCTGCAACTGGAGCTCAAACACCGAGCTATGGTTGAAGCGAACTTACTAGAAACTCAAAGACGCTTGCTAGAACAATTA
GAGTCAGCACCAGAAGCCATCATCTGTATTCGGGAAGACCAACGTATTCGCTTTGCCAACGAAGCGGCTGCCAAGCTGTT
TAGGCGCGGGCAAGAGCAACTTAAGCGCTCAATGGCCGATGAAATCATTGCACCTAAATACCTCAAGGTGGAGCAAGCAC
ACTACTGTGGTGACATCGATATCTATATTGATGACACACGTCAGCGCATACCAAGTGACATTCTTAAACTACCTGAAGGC
TCAGGGCTCGATACCATGTATATCTTCAATGTCGGTGGTGGCGTTAACTCAAACCGTATCAATAACCTTGAAACGGCGGT
TGAGGCGCTTTCAAGCTACGCCTTTGAAGGTGATAAAGATAAACTGCAACAACTGAAAGAACTCGGTGGAGAATTCACTC
GCCTTGCTGATAAGGCAACCGGTGAAGGTAAAAACAAACAAGAGCTAATGCGCGAAGTATTAGTTGAGGCGATGACCAAT
GCGATCATTTATTGGGAGTCAGTCACTGGTGAAACAAAGTTTGCTTTCGCAGAGAAGAGTGGCTTGTGGCGTGTTTATTT
AGACCGAAGTACGCTGCAAACTCGCACCTTAGATAAATACCTACGCTTTGAAACCTTACCTAAAACGCCTCGCTGGCGAA
CGGTATTGAGCTCTATCGAATTCATACTTGAGCACTGTAAAGAACAAACACCAGAAAGAACTCATATTGAGATGCTAAGG
GATAAACTACAGAAACTACTGACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS fold (PAS) (878-922)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.764