Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   VQ574_RS19105 Genome accession   NZ_CP142122
Coordinates   4082881..4083288 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas frequens strain XN05-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4077881..4088288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VQ574_RS19085 (VQ574_19085) - 4078841..4079707 (-) 867 WP_326429067.1 protein-glutamate O-methyltransferase -
  VQ574_RS19090 (VQ574_19090) - 4079769..4081817 (-) 2049 WP_063540694.1 methyl-accepting chemotaxis protein -
  VQ574_RS19095 (VQ574_19095) - 4081894..4082430 (-) 537 WP_110778835.1 chemotaxis protein CheW -
  VQ574_RS19100 (VQ574_19100) pilH 4082472..4082837 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  VQ574_RS19105 (VQ574_19105) pilG 4082881..4083288 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  VQ574_RS19110 (VQ574_19110) gshB 4083524..4084474 (+) 951 WP_017245425.1 glutathione synthase -
  VQ574_RS19115 (VQ574_19115) - 4084562..4085455 (+) 894 WP_017245426.1 energy transducer TonB -
  VQ574_RS19120 (VQ574_19120) - 4085600..4086169 (+) 570 WP_326429069.1 YqgE/AlgH family protein -
  VQ574_RS19125 (VQ574_19125) ruvX 4086166..4086594 (+) 429 WP_017245428.1 Holliday junction resolvase RuvX -
  VQ574_RS19130 (VQ574_19130) pyrR 4086616..4087131 (+) 516 WP_326429070.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  VQ574_RS19135 (VQ574_19135) - 4087190..4088206 (+) 1017 WP_063540691.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=921857 VQ574_RS19105 WP_003282729.1 4082881..4083288(-) (pilG) [Stutzerimonas frequens strain XN05-1]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=921857 VQ574_RS19105 WP_003282729.1 4082881..4083288(-) (pilG) [Stutzerimonas frequens strain XN05-1]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCTGTTGACGGTTTCGATGCGCTCGCCAAGATTGCAGATACTCATCCTCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGACGGCTATCAGACCTGTGCACTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTCTTCGACAAGGCGAAAGGGCGTATCGTCGGGTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTAGGCGCAATCAAGGCGCACGTCCCTGATTTCGCGCCGGTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4