Detailed information NTG0921851

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: VQ574_RS13120
• Genome accession: NZ_CP142122
• Coordinates: 2790941..2793166 (-)
• Length: 741 a.a.
• NCBI ID: WP_326428544.1
• Uniprot ID: -
• Organism: Stutzerimonas frequens strain XN05-1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2785941..2798166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VQ574_RS13085 (VQ574_13085)	murB	2786331..2787350 (-)	1020	WP_230726394.1	UDP-N-acetylmuramate dehydrogenase	-
VQ574_RS13090 (VQ574_13090)	-	2787347..2787814 (-)	468	WP_156243758.1	low molecular weight protein-tyrosine-phosphatase	-
VQ574_RS13095 (VQ574_13095)	kdsB	2787816..2788580 (-)	765	WP_110776487.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
VQ574_RS13100 (VQ574_13100)	-	2788577..2788762 (-)	186	WP_011913743.1	Trm112 family protein	-
VQ574_RS13105 (VQ574_13105)	lpxK	2788808..2789812 (-)	1005	WP_110776486.1	tetraacyldisaccharide 4'-kinase	-
VQ574_RS13110 (VQ574_13110)	-	2789812..2790240 (-)	429	WP_063539898.1	ExbD/TolR family protein	-
VQ574_RS13115 (VQ574_13115)	-	2790237..2790869 (-)	633	WP_063539899.1	MotA/TolQ/ExbB proton channel family protein	-
VQ574_RS13120 (VQ574_13120)	comA	2790941..2793166 (-)	2226	WP_326428544.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
VQ574_RS13125 (VQ574_13125)	-	2793313..2793828 (+)	516	WP_063539900.1	DUF2062 domain-containing protein	-
VQ574_RS13130 (VQ574_13130)	-	2793841..2795085 (-)	1245	WP_020307159.1	lipoprotein-releasing ABC transporter permease subunit	-
VQ574_RS13135 (VQ574_13135)	lolD	2795085..2795774 (-)	690	WP_063539901.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
VQ574_RS13140 (VQ574_13140)	-	2795782..2797029 (-)	1248	WP_102840158.1	lipoprotein-releasing ABC transporter permease subunit	-
VQ574_RS13145 (VQ574_13145)	-	2797063..2797698 (+)	636	WP_081253726.1	PilZ domain-containing protein	-
VQ574_RS13150 (VQ574_13150)	-	2797702..2798010 (+)	309	WP_156243746.1	phosphodiesterase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80833.25 Da
• Isoelectric Point: 9.4605

>NTDB_id=921851 VQ574_RS13120 WP_326428544.1 2790941..2793166(-) (comA) [Stutzerimonas frequens strain XN05-1]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRVRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSTVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHSFDYEAWLLARRIGAT
GTIKAGERLAASRASDGWRDRLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFEVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWKVLTRAQWAATLGLLPLLLAMGLPISASGPLANLLAVPWVSLTVPF
ALLGTLLLPLGGAGEALLSMVGFSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGFVLLLP
LAFPPRVEVPEGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGEFDTGERVVVPSLRTLGASRLDLLLLSHADNDHSG
GAEAVQRLLRVERVVSGEPSRHAPDLGAEPCESGSTWQWNDVRFSLWQWQAAQDSNQQSCVLQIEANGERILLTGDIDQP
AEQAWLASEQQMSSHWLLLPHHGSRSSSSEPFLQGVAAQAALISRSLHNPFGHPHPSVTARLEAFDIKAYDNALHGAIRI
DLGSFSPPELQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=921851 VQ574_RS13120 WP_326428544.1 2790941..2793166(-) (comA) [Stutzerimonas frequens strain XN05-1]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGCCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGTTGCTGCTGCTGCGCGTCCGCTGGGTGGCGCCGGGCCTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTGCCAGCGTCCATGGACGGTCGCACGTTCTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATTCAATCGCGCCATGCCGG
GTTGCCGTCGACGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGGGAGCGCTGGCGGCTGGCGGCGCGAC
TGAAACGGCCGCATGGCATGGTCAACCCGCATTCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGTATCGGCGCCACC
GGCACGATCAAGGCGGGTGAGCGCCTGGCGGCTTCGAGGGCAAGCGACGGATGGCGCGATCGGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCTGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGCTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGGCAGCACATCGGCATGTTGGCGGGGCTCCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCATGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGCGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGAGGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGGTTGCGCTTTCGTCATCTGGGCGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCCCTGGTGACATTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGTTCATGGCGCTGGTGGAAGGTCCTGACCCGGGCGCAGTGGGCGGCCACCCTCGGCCTGCTTCCGCTGTTGCTCG
CCATGGGGCTGCCGATAAGCGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTGCCTTGGGTGAGTCTCACCGTGCCCTTT
GCGTTGCTTGGTACGCTGCTGCTGCCGCTGGGCGGGGCTGGTGAAGCGTTGCTGTCGATGGTGGGCTTTTCGCTGGCACT
GCTGTTCGACGTGCTGGCAGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCTCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCAGCCGGTATTCCGCTGCGTTCGCTGGGCTTTGTGCTGCTGTTGCCG
TTGGCATTCCCGCCTCGTGTCGAGGTCCCGGAGGGCCGAGCGCAGGTCTGGGTGCTGGATGTGGGCCAGGGCCTGGCGGT
GCTGGTGCGCACCCGCGAGCATGCACTGCTTTACGATGCCGGGCCGAAACAGGGCGAGTTCGACACGGGCGAGCGGGTGG
TGGTCCCATCGCTCCGCACCCTTGGCGCGAGCCGGTTGGACCTGCTGTTGCTTAGCCATGCCGATAATGATCATTCGGGC
GGTGCGGAGGCGGTCCAGCGGCTACTCCGGGTCGAGCGGGTGGTCAGTGGCGAGCCGTCTCGCCACGCGCCGGATCTGGG
CGCCGAACCTTGCGAAAGCGGCAGCACTTGGCAATGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGGCGGCGCAGG
ACAGCAACCAGCAGTCCTGCGTGCTGCAGATCGAGGCCAACGGCGAGCGAATCCTGCTCACCGGTGACATCGACCAGCCC
GCCGAGCAGGCTTGGCTGGCAAGTGAGCAGCAGATGTCATCGCACTGGCTGCTGCTGCCCCATCACGGCAGCCGCAGCTC
CTCGTCGGAGCCGTTTCTGCAAGGCGTGGCCGCGCAAGCCGCGCTGATCTCGCGAAGTCTGCACAATCCGTTCGGCCACC
CGCACCCGAGCGTGACCGCGCGGCTCGAGGCGTTCGATATCAAGGCCTACGACAACGCGTTGCATGGCGCCATCCGGATC
GATCTGGGCAGTTTTTCGCCGCCAGAGCTGCAACGCTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-653)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.106	96.356	0.637
comA	Ralstonia pseudosolanacearum GMI1000	36.458	100	0.378