Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AB3445_RS04390 Genome accession   NZ_CP162422
Coordinates   865306..866592 (-) Length   428 a.a.
NCBI ID   WP_194085837.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TUM22723     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 860306..871592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3445_RS04385 (AB3445_04385) - 863583..865286 (-) 1704 WP_000814103.1 proline--tRNA ligase -
  AB3445_RS04390 (AB3445_04390) eeP 865306..866592 (-) 1287 WP_194085837.1 RIP metalloprotease RseP Regulator
  AB3445_RS04395 (AB3445_04395) - 866804..867586 (-) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  AB3445_RS04400 (AB3445_04400) - 867593..868363 (-) 771 WP_000473705.1 isoprenyl transferase -
  AB3445_RS04405 (AB3445_04405) frr 868736..869290 (-) 555 WP_001280006.1 ribosome recycling factor -
  AB3445_RS04410 (AB3445_04410) pyrH 869309..870031 (-) 723 WP_000057330.1 UMP kinase -
  AB3445_RS04415 (AB3445_04415) tsf 870168..871049 (-) 882 WP_000201387.1 translation elongation factor Ts -
  AB3445_RS04420 (AB3445_04420) - 871084..871197 (-) 114 WP_001789890.1 hypothetical protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48122.56 Da        Isoelectric Point: 9.5354

>NTDB_id=921364 AB3445_RS04390 WP_194085837.1 865306..866592(-) (eeP) [Staphylococcus aureus strain TUM22723]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGLKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTEKKLTKVSSETKYVLGFQPASEHTLFKPIVFGFKSFLIGSTYIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=921364 AB3445_RS04390 WP_194085837.1 865306..866592(-) (eeP) [Staphylococcus aureus strain TUM22723]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCTAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCCGGTATGAACGTTAAAATTAAACTTAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAGGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGCACGCCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGATTACAAAAAGGTGATAAGATCGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAAAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTTTTTAAACCAATTGTATTCGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATAATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.443

100

0.397

  eeP Streptococcus thermophilus LMG 18311

38.889

100

0.393