Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   VOI49_RS10575 Genome accession   NZ_CP142018
Coordinates   2104482..2105255 (+) Length   257 a.a.
NCBI ID   WP_003048958.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain lu24     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2099482..2110255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VOI49_RS10565 rlmH 2102458..2102937 (-) 480 WP_226314022.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  VOI49_RS10570 htrA 2103147..2104367 (+) 1221 WP_003048956.1 S1C family serine protease Regulator
  VOI49_RS10575 spo0J 2104482..2105255 (+) 774 WP_003048958.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 28964.79 Da        Isoelectric Point: 9.8968

>NTDB_id=921045 VOI49_RS10575 WP_003048958.1 2104482..2105255(+) (spo0J) [Streptococcus dysgalactiae strain lu24]
MTELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKTNGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHEEVAKYMGKSRPYISNTLRLLQLPKIISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKSTPIPKNKNIFITSLEDQLAQSLGLPVKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=921045 VOI49_RS10575 WP_003048958.1 2104482..2105255(+) (spo0J) [Streptococcus dysgalactiae strain lu24]
ATGACTGAACTATTGAAATCTATTCCAATTGAAGATATTGTAGCCAATCCCTATCAACCAAGGCTTCAGTTTAATCAAAA
AGAACTAGAAGATTTGGCTAATTCAATCAAGACAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTTGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAAGTACCTGCTATTGTCAAA
AACATGTCCTCTTTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTGCAACGTGCTGATTTGAATCCCATTGAAGAAGC
AAAAGCTTATCAGCTACTGATTGAAAAAAATCAAATGACACATGAAGAGGTTGCCAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTACTGCAACTTCCGAAAATAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACAGACGAAAAGGAACAGTTAGTTTACGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTACGACAAATTGAGCATATGGTAACTCCAAAACTTAAAAGTACTCCTATCCCAAAAAATAAAAATATTTTTATCACCT
CTTTAGAAGATCAGCTGGCCCAATCTCTAGGGTTACCAGTCAAAATCAAATTGAAATCAACTCAAAGTGGTCAATTGCTG
TTACCATTTGCTAACCAAGAGGAACTAAACAGAATTATCAACAAGCTACTTTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-195)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.687

100

0.591